User profiles for Ylva Ivarsson

Ylva Ivarsson

Professor, Uppsala University
Verified email at kemi.uu.se
Cited by 4597

Syndecan–syntenin–ALIX regulates the biogenesis of exosomes

…, A Melchior, G Degeest, A Geeraerts, Y Ivarsson… - Nature cell …, 2012 - nature.com
The biogenesis of exosomes, small secreted vesicles involved in signalling processes, remains
incompletely understood. Here, we report evidence that the syndecan heparan sulphate …

Misregulated alternative splicing of BIN1 is associated with T tubule alterations and muscle weakness in myotonic dystrophy

…, AF Klein, C Hammer, S Vassilopoulos, Y Ivarsson… - Nature medicine, 2011 - nature.com
Myotonic dystrophy is the most common muscular dystrophy in adults and the first recognized
example of an RNA-mediated disease. Congenital myotonic dystrophy (CDM1) and …

[HTML][HTML] Plasticity of PDZ domains in ligand recognition and signaling

Y Ivarsson - FEBS letters, 2012 - Elsevier
The PDZ domain is a protein–protein interacting module that plays an important role in the
organization of signaling complexes. The recognition of short intrinsically disordered C-…

Large-scale interaction profiling of PDZ domains through proteomic peptide-phage display using human and viral phage peptidomes

Y Ivarsson, R Arnold, M McLaughlin… - Proceedings of the …, 2014 - National Acad Sciences
The human proteome contains a plethora of short linear motifs (SLiMs) that serve as binding
interfaces for modular protein domains. Such interactions are crucial for signaling and other …

[HTML][HTML] Large scale discovery of coronavirus-host factor protein interaction motifs reveals SARS-CoV-2 specific mechanisms and vulnerabilities

…, NE Davey, AK Överby, J Nilsson, Y Ivarsson - Nature …, 2021 - nature.com
Viral proteins make extensive use of short peptide interaction motifs to hijack cellular host
factors. However, most current large-scale methods do not identify this important class of …

Proteome‐scale mapping of binding sites in the unstructured regions of the human proteome

…, P Jemth, NE Davey, Y Ivarsson - Molecular Systems …, 2022 - embopress.org
Specific protein–protein interactions are central to all processes that underlie cell physiology.
Numerous studies have together identified hundreds of thousands of human protein–…

Discovery of short linear motif‐mediated interactions through phage display of intrinsically disordered regions of the human proteome

…, D Dong, N Markova, PM Kim, Y Ivarsson - The FEBS …, 2017 - Wiley Online Library
The intrinsically disordered regions of eukaryotic proteomes are enriched in short linear
motifs ( SL iMs), which are of crucial relevance for cellular signaling and protein regulation; …

[HTML][HTML] The next wave of interactomics: Mapping the SLiM-based interactions of the intrinsically disordered proteome

NE Davey, L Simonetti, Y Ivarsson - Current opinion in structural biology, 2023 - Elsevier
Short linear motifs (SLiMs) are a unique and ubiquitous class of protein interaction modules
that perform key regulatory functions and drive dynamic complex formation. For decades, …

Affinity and specificity of motif-based protein–protein interactions

Y Ivarsson, P Jemth - Current opinion in structural biology, 2019 - Elsevier
It is becoming increasingly clear that eukaryotic cell physiology is largely controlled by
protein–protein interactions involving disordered protein regions, which usually interact with …

Motif-dependent binding on the intervening domain regulates O-GlcNAc transferase

…, J Xie, C Benz, A Wang, Y Ivarsson… - Nature Chemical …, 2023 - nature.com
The modification of intracellular proteins with O-linked β-N-acetylglucosamine (O-GlcNAc)
moieties is a highly dynamic process that spatiotemporally regulates nearly every important …