Androgen and glucocorticoid receptor direct distinct transcriptional programs by receptor-specific and shared DNA binding sites

M Kulik, M Bothe, G Kibar, A Fuchs… - Nucleic acids …, 2021 - academic.oup.com
The glucocorticoid (GR) and androgen (AR) receptors execute unique functions in vivo, yet
have nearly identical DNA binding specificities. To identify mechanisms that facilitate …

Glucocorticoid signaling induces transcriptional memory and universally reversible chromatin changes

M Bothe, R Buschow, SH Meijsing - Life science alliance, 2021 - life-science-alliance.org
Glucocorticoids are stress hormones that elicit cellular responses by binding to the glucocorticoid
receptor, a ligand-activated transcription factor. The exposure of cells to this hormone …

[HTML][HTML] Synthetic STARR-seq reveals how DNA shape and sequence modulate transcriptional output and noise

S Schöne, M Bothe, E Einfeldt, M Borschiwer… - PLoS …, 2018 - journals.plos.org
The binding of transcription factors to short recognition sequences plays a pivotal role in
controlling the expression of genes. The sequence and shape characteristics of binding sites …

High-throughput screening of glucocorticoid-induced enhancer activity reveals mechanisms of stress-related psychiatric disorders

S Penner-Goeke, M Bothe, N Rek… - Proceedings of the …, 2023 - National Acad Sciences
Exposure to stressful life events increases the risk for psychiatric disorders. Mechanistic insight
into the genetic factors moderating the impact of stress can increase our understanding of …

[HTML][HTML] The Neurobiology of Stress: Vulnerability, Resilience, and Major Depression: High-throughput screening of glucocorticoid-induced enhancer activity reveals …

S Penner-Goeke, M Bothe, N Rek… - Proceedings of the …, 2023 - ncbi.nlm.nih.gov
Results Identification of Allele-Specific Regulatory Elements Modulated by a Glucocorticoid
Receptor Agonist in Response to Stress Using STARR-seq. We conducted an enhancer …

Expanding the repertoire of glucocorticoid receptor target genes by engineering genomic response elements

…, MC Rothkegel, M Borschiwer, M Bothe… - Life Science …, 2019 - life-science-alliance.org
The glucocorticoid receptor (GR), a hormone-activated transcription factor, binds to a myriad
of genomic binding sites yet seems to regulate a much smaller number of genes. Genome-…

Loss of the hematopoietic stem cell factor GATA2 in the osteogenic lineage impairs trabecularization and mechanical strength of bone

…, C Fischer, TH Ambrosi, M Bothe… - … and cellular biology, 2018 - Taylor & Francis
The transcription factor GATA2 is required for expansion and differentiation of hematopoietic
stem cells (HSCs). In mesenchymal stem cells (MSCs), GATA2 blocks adipogenesis, but its …

Assessment of glucocorticoid-induced enhancer activity of eSNP regions using STARR-seq reveals novel molecular mechanisms in psychiatric disorders

S Penner-Goeke, M Bothe, N Kappelmann… - medRxiv, 2022 - medrxiv.org
Exposure to stressful events increases risk for psychiatric disorders. Mechanistic insight into
genetic factors moderating the impact of stress can increase our understanding of disease …

Evaluation of Sadagopan et al.: X chromosome inactivation in male cancers

M Bothe, EG Schulz - Cell Systems, 2022 - cell.com
Melissa Bothe1 and Edda G. Schulz1,* 1Max Planck Institute for Molecular Genetics,
Ihnestraße 63-67, 14195 Berlin, Germany *Correspondence: edda.schulz@molgen.mpg.de …

Antisense transcription can induce expression memory via stable promoter repression

…, S Oeverdieck, L Librenjak, B Boesen, M Bothe… - bioRxiv, 2024 - biorxiv.org
The capacity of cells to retain a memory of previous signals enables them to adopt unique
cell fates and adjust to their surrounding environment. The underlying gene expression …