User profiles for Loïc Mangnier
Loïc MangnierArnaud Droit Lab Verified email at ulaval.ca Cited by 70 |
Extensive and accurate benchmarking of DIA acquisition methods and software tools using a complex proteomic standard
…, C Joly-Beauparlant, L Mangnier… - Journal of Proteome …, 2021 - ACS Publications
Over the past decade, the data-independent acquisition mode has gained popularity for
broad coverage of complex proteomes by LC-MS/MS and quantification of low-abundance …
broad coverage of complex proteomes by LC-MS/MS and quantification of low-abundance …
[HTML][HTML] DIA proteomics data from a UPS1-spiked E. coli protein mixture processed with six software tools
In this article, we provide a proteomic reference dataset that has been initially generated for
a benchmarking of software tools for Data-Independent Acquisition (DIA) analysis. This large …
a benchmarking of software tools for Data-Independent Acquisition (DIA) analysis. This large …
[HTML][HTML] Sex difference contributes to phenotypic diversity in individuals with neurodevelopmental disorders
T Cuppens, J Shatto, L Mangnier, AA Kumar… - Frontiers in …, 2023 - frontiersin.org
Objective Gain a better understanding of sex-specific differences in individuals with global
developmental delay (GDD), with a focus on phenotypes and genotypes. Methods Using the …
developmental delay (GDD), with a focus on phenotypes and genotypes. Methods Using the …
Cis-regulatory hubs: a new 3D model of complex disease genetics with an application to schizophrenia
The 3D conformation of the chromatin creates complex networks of noncoding regulatory
regions (distal elements) and promoters impacting gene regulation. Despite the importance of …
regions (distal elements) and promoters impacting gene regulation. Despite the importance of …
Intégration d'annotations fonctionnelles dans les tests d'agrégation de variants rares sous vraisemblance rétrospective dans le cadre de devis familiaux
L Mangnier - 2022 - corpus.ulaval.ca
Depuis ces vingt dernières années et la démocratisation des technologies de séquençage
haut débit de l'ADN, l'accessibilité des données génomiques a permis le développement de …
haut débit de l'ADN, l'accessibilité des données génomiques a permis le développement de …
Comprehensive benchmark of integrative strategies for analyzing microbiome-metabolome relationships
Background: The exponential growth of high-throughput sequencing technologies was an
incredible opportunity for researchers to combine different -omics within computational …
incredible opportunity for researchers to combine different -omics within computational …
CTCF mediates the Activity-by-contact derived cis-regulatory hubs
The 3D chromatin architecture establishes a complex network of genes and regulatory
elements necessary for transcriptomic regulation in development and disease. This network can …
elements necessary for transcriptomic regulation in development and disease. This network can …
Cis-Regulatory Hubs: a Relevant 3D Model to Study the Genetics of Complex Diseases with an Application to Schizophrenia
Background The 3-dimensional (3D) conformation of the chromatin creates complex networks
of noncoding regulatory regions (distal elements) and genes with important implications in …
of noncoding regulatory regions (distal elements) and genes with important implications in …
RetroFun-RVS: a retrospective family-based framework for rare variant analysis incorporating functional annotations
L Mangnier, I Ruczinski, J Ricard, C Moreau, S Girard… - bioRxiv, 2022 - biorxiv.org
A large proportion of genetic variations involved in complex diseases are rare and located
within non-coding regions, making the interpretation of underlying biological mechanisms a …
within non-coding regions, making the interpretation of underlying biological mechanisms a …
[CITATION][C] Sex difference contributes to phenotypic diversity in individidual neurodevelopmental differences
…, J Shatto, L Mangnier… - EUROPEAN …, 2024 - … , 4 CRINAN ST, LONDON, N1 9XW …