User profiles for Jonathan Ronen

Jonathan Ronen

Max Delbruck Center for Molecular Medicine, Berlin
Verified email at mdc-berlin.de
Cited by 508

Social networks and protest participation: Evidence from 130 million Twitter users

JM Larson, J Nagler, J Ronen… - American Journal of …, 2019 - Wiley Online Library
Pinning down the role of social ties in the decision to protest has been notoriously elusive,
largely due to data limitations. Social media and their global use by protesters offer an …

[HTML][HTML] Identifying tumor cells at the single-cell level using machine learning

J Dohmen, A Baranovskii, J Ronen, B Uyar, V Franke… - Genome Biology, 2022 - Springer
Tumors are complex tissues of cancerous cells surrounded by a heterogeneous cellular
microenvironment with which they interact. Single-cell sequencing enables molecular …

Evaluation of colorectal cancer subtypes and cell lines using deep learning

J Ronen, S Hayat, A Akalin - Life science alliance, 2019 - life-science-alliance.org
Colorectal cancer (CRC) is a common cancer with a high mortality rate and a rising incidence
rate in the developed world. Molecular profiling techniques have been used to better …

[HTML][HTML] netSmooth: Network-smoothing based imputation for single cell RNA-seq

J Ronen, A Akalin - F1000Research, 2018 - ncbi.nlm.nih.gov
Single cell RNA-seq (scRNA-seq) experiments suffer from a range of characteristic technical
biases, such as dropouts (zero or near zero counts) and high variance. Current analysis …

PiGx: reproducible genomics analysis pipelines with GNU Guix

…, V Franke, A Gosdschan, K Wreczycka, J Ronen… - …, 2018 - academic.oup.com
In bioinformatics, as well as other computationally intensive research fields, there is a need
for workflows that can reliably produce consistent output, from known sources, independent …

Political knowledge and misinformation in the era of social media: Evidence from the 2015 UK election

K Munger, PJ Egan, J Nagler, J Ronen… - British Journal of …, 2022 - cambridge.org
Does social media educate voters, or mislead them? This study measures changes in
political knowledge among a panel of voters surveyed during the 2015 UK general election …

Functional interplay of Epstein-Barr virus oncoproteins in a mouse model of B cell lymphomagenesis

T Sommermann, T Yasuda, J Ronen… - Proceedings of the …, 2020 - National Acad Sciences
Epstein-Barr virus (EBV) is a B cell transforming virus that causes B cell malignancies under
conditions of immune suppression. EBV orchestrates B cell transformation through its latent …

Multi-omics and deep learning provide a multifaceted view of cancer

B Uyar, J Ronen, V Franke, G Gargiulo, A Akalin - bioRxiv, 2021 - biorxiv.org
Cancer is a complex disease with a large financial and healthcare burden on society. One
hallmark of the disease is the uncontrolled growth and proliferation of malignant cells. Unlike …

On stabilization of switched linear systems

Z Artstein, J Ronen - Systems & control letters, 2008 - Elsevier
The paper examines the possibility to stabilize a switched linear control system with a static
linear feedback. We focus on a stronger version of stabilization, namely, stabilization …

Reproducible genomics analysis pipelines with GNU Guix

…, V Franke, A Gosdschan, K Wreczycka, J Ronen… - bioRxiv, 2018 - biorxiv.org
In bioinformatics, as well as other computationally-intensive research fields, there is a need
for workflows that can reliably produce consistent output, independent of the software …