Eukaryotic plankton diversity in the sunlit ocean
Marine plankton support global biological and geochemical processes. Surveys of their
biodiversity have hitherto been geographically restricted and have not accounted for the full …
biodiversity have hitherto been geographically restricted and have not accounted for the full …
[HTML][HTML] A holistic approach to marine eco-systems biology
… Colomban De Vargas, … Colomban De Vargas, … Citation: Karsenti E, Acinas SG, Bork
P, Bowler C, De Vargas C, Raes J, et al. (2011) A Holistic Approach to Marine Eco-Systems …
P, Bowler C, De Vargas C, Raes J, et al. (2011) A Holistic Approach to Marine Eco-Systems …
Tara Oceans: towards global ocean ecosystems biology
…, MB Sullivan, P Wincker, C de Vargas - Nature Reviews …, 2020 - nature.com
A planetary-scale understanding of the ocean ecosystem, particularly in light of climate
change, is crucial. Here, we review the work of Tara Oceans, an international, multidisciplinary …
change, is crucial. Here, we review the work of Tara Oceans, an international, multidisciplinary …
Structure and function of the global ocean microbiome
…, Tara Oceans coordinators, C Bowler, C De Vargas… - Science, 2015 - science.org
Microbes are dominant drivers of biogeochemical processes, yet drawing a global picture of
functional diversity, microbial community structure, and their ecological determinants …
functional diversity, microbial community structure, and their ecological determinants …
Determinants of community structure in the global plankton interactome
Species interaction networks are shaped by abiotic and biotic factors. Here, as part of the
Tara Oceans project, we studied the photic zone interactome using environmental factors and …
Tara Oceans project, we studied the photic zone interactome using environmental factors and …
[HTML][HTML] Pan genome of the phytoplankton Emiliania underpins its global distribution
…, AF Sarno, J Shmutz, D Schroeder, C De Vargas… - Nature, 2013 - nature.com
Coccolithophores have influenced the global climate for over 200 million years 1 . These
marine phytoplankton can account for 20 per cent of total carbon fixation in some systems 2 . …
marine phytoplankton can account for 20 per cent of total carbon fixation in some systems 2 . …
[HTML][HTML] Accessing the genomic information of unculturable oceanic picoeukaryotes by combining multiple single cells
…, ME Sieracki, O Jaillon, P Wincker, C Vargas… - Scientific Reports, 2017 - nature.com
Pico-sized eukaryotes play key roles in the functioning of marine ecosystems, but we still
have a limited knowledge on their ecology and evolution. The MAST-4 lineage is of particular …
have a limited knowledge on their ecology and evolution. The MAST-4 lineage is of particular …
UniEuk: Time to Speak a Common Language in Protistology!
…, J Del Campo, P Yilmaz, C de Vargas - Journal of Eukaryotic …, 2017 - Wiley Online Library
Universal taxonomic frameworks have been critical tools to structure the fields of botany,
zoology, mycology, and bacteriology as well as their large research communities. Animals, …
zoology, mycology, and bacteriology as well as their large research communities. Animals, …
Metagenomic 16S rDNA I llumina tags are a powerful alternative to amplicon sequencing to explore diversity and structure of microbial communities
Sequencing of 16S rDNA polymerase chain reaction ( PCR ) amplicons is the most common
approach for investigating environmental prokaryotic diversity, despite the known biases …
approach for investigating environmental prokaryotic diversity, despite the known biases …
The Protist Ribosomal Reference database (PR2): a catalog of unicellular eukaryote Small Sub-Unit rRNA sequences with curated taxonomy
…, C Boutte, G Burgaud, C de Vargas… - Nucleic acids …, 2012 - academic.oup.com
The interrogation of genetic markers in environmental meta-barcoding studies is currently
seriously hindered by the lack of taxonomically curated reference data sets for the targeted …
seriously hindered by the lack of taxonomically curated reference data sets for the targeted …