|
| Status |
Public on Dec 31, 2016 |
| Title |
RNA-seq of MCF7 cells treated with epigenetic therapy |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
RNA-seq was performed after MCF7 cells were treated with S2101, UNC0638, GSK343, depsipeptide alone or in combination with decitabine
|
| |
|
| Overall design |
Biological triplicates were performed for a total of 30 samples. Fold change of each gene was calculated by comparing change in expression after inhibitor treatment to expression in the control samples
|
| |
|
| Contributor(s) |
Sato T, Cesaroni M, Panjarian S, Tran A, Madzo J, Okamoto Y, Zhang H, Chen X, Jelinek J, Issa JJ |
| Citation(s) |
27879268 |
| Submission date |
Oct 14, 2015 |
| Last update date |
May 15, 2019 |
| Contact name |
Takahiro Sato |
| Organization name |
Temple University
|
| Department |
Fels Institute for Cancer Research and Molecular Biology
|
| Street address |
3307 North Broad Street
|
| City |
Philadelphia |
| State/province |
PA |
| ZIP/Postal code |
19140 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL16791 |
Illumina HiSeq 2500 (Homo sapiens) |
|
| Samples (30)
|
|
| Relations |
| BioProject |
PRJNA298835 |
| SRA |
SRP064832 |
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