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Series GSE171139 Query DataSets for GSE171139
Status Public on Oct 10, 2021
Title The lncRNA HERVH negatively regulates chromatin targeting and remodeling mediated by CHD7
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Other
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 34663690
Submission date Mar 30, 2021
Last update date Jan 10, 2022
Contact name Fei Ji
Organization name Massachusetts General Hospital
Street address 185 Cambridge St
City Boston
ZIP/Postal code 02129
Country USA
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (61)
GSM5219560 hESC_WT_ATAC-seq_rep1
GSM5219561 hESC_WT_ATAC-seq_rep2
GSM5219562 hESC_CHD7 KO_ATAC-seq_rep1
This SuperSeries is composed of the following SubSeries:
GSE171135 The lncRNA HERVH negatively regulates chromatin targeting and remodeling mediated by CHD7 [ATAC-seq]
GSE171136 The lncRNA HERVH negatively regulates chromatin targeting and remodeling mediated by CHD7 [CUT&RUN]
GSE171137 The lncRNA HERVH negatively regulates chromatin targeting and remodeling mediated by CHD7 [PAR-CLIP]
Relations
BioProject PRJNA718532

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE171139_RAW.tar 4.9 Gb (http)(custom) TAR (of BIGWIG, TXT)
SRA Run SelectorHelp
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