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Series GSE138434 Query DataSets for GSE138434
Status Public on May 27, 2021
Title CDH2 and Cx43 knockdown CSCs compaired with scramble (control) in breast cancer
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We report the gene expression changes in CDH2 and Cx43 knockdown CSCs as compaired to scramble (control) in MDA-MB-231
 
Overall design RNA sequencing on CDH2 and Cx43 knockdown CSCs to find difference in expression from control
 
Contributor(s) Sinha G, Rameshwar P, El-Far MH
Citation(s) 34078741
Submission date Oct 04, 2019
Last update date Aug 25, 2021
Contact name Pranela Rameshwar
E-mail(s) rameshwa@njms.rutgers.edu
Organization name Rutgers NJ Medical School
Department Medicine
Lab Stem Cell and Translational Medicine
Street address 185 South Orange Avenue
City Newark
State/province NJ
ZIP/Postal code 07103
Country USA
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (8)
GSM4107905 CDH2 shRNA_CSC_1
GSM4107906 CDH2 shRNA_CSC_2
GSM4107907 CDH2 shRNA_CSC_3
Relations
BioProject PRJNA575855

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE138434_RAW.tar 680.0 Kb (http)(custom) TAR (of TXT)
Raw data are available in SRA
Processed data provided as supplementary file

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