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GEO accession:
Series GSE103008
Query DataSets for GSE103008
Status
Public on Dec 10, 2018
Title
Variants of DNMT3A cause transcript-specific DNA methylation and gene expression changes
Organism
Homo sapiens
Experiment type
Expression profiling by array
Methylation profiling by array
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
30582132
Submission date
Aug 23, 2017
Last update date
Jul 25, 2021
Contact name
Wolfgang Wagner
E-mail(s)
wwagner@ukaachen.de
Phone
+49 241 8088611
Organization name
RWTH Aachen University
Department
Helmholtz Institute for Biomedical Engineering
Lab
Stem Cell Biology and Cellular Engineering
Street address
Pauwelsstrasse 20
City
Aachen
ZIP/Postal code
52074
Country
Germany
Platforms (2)
GPL6244
[HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version]
GPL13534
Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)
Samples (48)
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GSM2752440
HSC_1 KD Tr.1+3_methylation
GSM2752441
HSC_1 KD Tr.2_methylation
GSM2752442
HSC_1 KD Tr.4_methylation
GSM2752443
HSC_1 Scramble_methylation
GSM2752444
HSC_2 KD Tr.1+3_methylation
GSM2752445
HSC_2 KD Tr.2_methylation
GSM2752446
HSC_2 KD Tr.4_methylation
GSM2752447
HSC_2 Scramble_methylation
GSM2752448
HSC_3 KD Tr.1+3_methylation
GSM2752449
HSC_3 KD Tr.2_methylation
GSM2752450
HSC_3 KD Tr.4_methylation
GSM2752451
HSC_3 Scramble_methylation
GSM2752452
HSC_4 OE Tr.1+3_methylation
GSM2752453
HSC_4 OE Tr.2_methylation
GSM2752454
HSC_4 OE Tr.4_methylation
GSM2752455
HSC_4 Empty_methylation
GSM2752456
HSC_5 OE Tr.1+3_methylation
GSM2752457
HSC_5 OE Tr.2_methylation
GSM2752458
HSC_5 OE Tr.4_methylation
GSM2752459
HSC_5 Empty_methylation
GSM2752460
HSC_6 OE Tr.1+3_methylation
GSM2752461
HSC_6 OE Tr.2_methylation
GSM2752462
HSC_6 OE Tr.4_methylation
GSM2752463
HSC_6 Empty_methylation
GSM2752464
HSC_1 KD Tr.1+3
GSM2752465
HSC_1 KD Tr.2
GSM2752466
HSC_1 KD Tr.4
GSM2752467
HSC_1 Scramble
GSM2752468
HSC_2 KD Tr.1+3
GSM2752469
HSC_2 KD Tr.2
GSM2752470
HSC_2 KD Tr.4
GSM2752471
HSC_2 Scramble
GSM2752472
HSC_3 KD Tr.1+3
GSM2752473
HSC_3 KD Tr.2
GSM2752474
HSC_3 KD Tr.4
GSM2752475
HSC_3 Scramble
GSM2752476
HSC_4 OE Tr.1+3
GSM2752477
HSC_4 OE Tr.2
GSM2752478
HSC_4 OE Tr.4
GSM2752479
HSC_4 Empty
GSM2752480
HSC_5 OE Tr.1+3
GSM2752481
HSC_5 OE Tr.2
GSM2752482
HSC_5 OE Tr.4
GSM2752483
HSC_5 Empty
GSM2752484
HSC_6 OE Tr.1+3
GSM2752485
HSC_6 OE Tr.2
GSM2752486
HSC_6 OE Tr.4
GSM2752487
HSC_6 Empty
This SuperSeries is composed of the following SubSeries:
GSE103006
Variants of DNMT3A cause transcript-specific DNA methylation changes
GSE103007
Variants of DNMT3A cause transcript-specific gene expression changes
Relations
BioProject
PRJNA399744
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE103008_RAW.tar
469.8 Mb
(http)
(custom)
TAR (of CEL, IDAT)
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