Structural basis of death domain signaling in the p75 neurotrophin receptor

Elife. 2015 Dec 8:4:e11692. doi: 10.7554/eLife.11692.

Abstract

Death domains (DDs) mediate assembly of oligomeric complexes for activation of downstream signaling pathways through incompletely understood mechanisms. Here we report structures of complexes formed by the DD of p75 neurotrophin receptor (p75(NTR)) with RhoGDI, for activation of the RhoA pathway, with caspase recruitment domain (CARD) of RIP2 kinase, for activation of the NF-kB pathway, and with itself, revealing how DD dimerization controls access of intracellular effectors to the receptor. RIP2 CARD and RhoGDI bind to p75(NTR) DD at partially overlapping epitopes with over 100-fold difference in affinity, revealing the mechanism by which RIP2 recruitment displaces RhoGDI upon ligand binding. The p75(NTR) DD forms non-covalent, low-affinity symmetric dimers in solution. The dimer interface overlaps with RIP2 CARD but not RhoGDI binding sites, supporting a model of receptor activation triggered by separation of DDs. These structures reveal how competitive protein-protein interactions orchestrate the hierarchical activation of downstream pathways in non-catalytic receptors.

Keywords: binding; biochemistry; biophysics; human; mouse; nmr; p75; receptor; structural biology; structure.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Humans
  • Magnetic Resonance Spectroscopy
  • Models, Molecular
  • NF-kappa B / metabolism
  • Nerve Tissue Proteins / chemistry
  • Nerve Tissue Proteins / metabolism*
  • Protein Binding
  • Protein Conformation
  • Protein Multimerization
  • Receptor-Interacting Protein Serine-Threonine Kinase 2 / chemistry
  • Receptor-Interacting Protein Serine-Threonine Kinase 2 / metabolism*
  • Receptors, Nerve Growth Factor / chemistry
  • Receptors, Nerve Growth Factor / metabolism*
  • Signal Transduction*
  • rho-Specific Guanine Nucleotide Dissociation Inhibitors / chemistry
  • rho-Specific Guanine Nucleotide Dissociation Inhibitors / metabolism*

Substances

  • NF-kappa B
  • NGFR protein, human
  • Nerve Tissue Proteins
  • Receptors, Nerve Growth Factor
  • rho-Specific Guanine Nucleotide Dissociation Inhibitors
  • RIPK2 protein, human
  • Receptor-Interacting Protein Serine-Threonine Kinase 2

Grants and funding

The funders had no role in study design, data collection and interpretation, or the decision to submit the work for publication.