Genome-wide survey of non-essential genes required for slowed DNA synthesis-induced filamentous growth in yeast

Yeast. 2005 Jan 30;22(2):79-90. doi: 10.1002/yea.1195.

Abstract

We recently discovered that slowed DNA synthesis induces filamentous differentiation in S. cerevisiae. We screened the BY yeast deletion strains and identified four classes of non-essential genes that are required for both slowed DNA-induced filamentous growth and classic forms of filamentous growth: (a) genes encoding regulators of the actin cytoskeleton and cell polarity, ABP1, CAP2 and HUF1 (=YOR300W), in addition to the previously known BNI1, BUD2, PEA2, SPA2 and TPM1; (b) genes that are likely involved in cell wall biosynthesis, ECM25, GAS1 and PRS3; (c) genes encoding possible regulators of protein secretion, SEC66, RPL21A and RPL34B; (d) genes encoding factors for normal mitochondrial function, IML1 and UGO1. These results showed that pseudohyphal formation involves not the only previously known regulation of the actin cytoskeleton/cell polarity but also regulation of cell wall synthesis, protein secretion and mitochondrial function. Identification of multiple classes of genes that are required for both slowed DNA synthesis-induced and classic forms of filamentous growth confirms that slowed DNA synthesis-induced filamentous growth is bone fide filamentous differentiation.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Actins / genetics
  • Actins / physiology
  • Cell Polarity / genetics
  • Cell Polarity / physiology
  • Cell Wall Skeleton / biosynthesis
  • Cell Wall Skeleton / genetics
  • Cell Wall Skeleton / physiology
  • Cytoskeleton / genetics
  • Cytoskeleton / physiology
  • DNA Replication / genetics*
  • DNA, Fungal / biosynthesis*
  • DNA, Fungal / chemistry
  • DNA, Fungal / genetics
  • Gene Expression Regulation, Fungal / genetics
  • Gene Expression Regulation, Fungal / physiology
  • Genes, Fungal / genetics*
  • Genes, Fungal / physiology
  • Genome, Fungal*
  • Hydroxyurea / pharmacology
  • Mitochondria / genetics
  • Mitochondria / physiology
  • Morphogenesis / genetics
  • Morphogenesis / physiology
  • Mutagenesis, Insertional
  • Saccharomyces cerevisiae / genetics*
  • Saccharomyces cerevisiae / growth & development*

Substances

  • Actins
  • Cell Wall Skeleton
  • DNA, Fungal
  • Hydroxyurea