Elsevier

Protist

Volume 169, Issue 1, February 2018, Pages 79-106
Protist

Original Paper
A Re-investigation of Sarcinochrysis marina (Sarcinochrysidales, Pelagophyceae) from its Type Locality and the Descriptions of Arachnochrysis, Pelagospilus, Sargassococcus and Sungminbooa genera nov.

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Systematists increasingly use molecular markers to identify species; however, most microalgae were described before gene sequencing and type specimens were often ink drawings. Cryptic speciation and biogeographic isolation are other potential problems when anchoring an old species name with a modern gene sequence. Therefore when biological type material is absent, the best approach is to recollect the alga from the type locality and sequence genes. Sarcinochrysis marina, described in 1930 by Geitler from the Canary Islands, Spain, is the oldest Pelagophyceae genus. Geitler used two cultures in his study, but these cultures no longer exist. We re-isolated S. marina from the type locality near Las Palmas, Gran Canaria. Furthermore, we included additional Pelagophyceae strains that were isolated from natural habitats for this study or were obtained from culture collections. We produced 85 sequences, representing the nuclear-encoded SSU rRNA and the plastid-encoded rbcL, psaA, psaB, psbA, and psbC genes. The sequences were used to infer maximum likelihood phylogenetic trees. We anchored the name Sarcinochrysis marina using the Las Palmas isolate, and we described four new genera (Arachnochrysis, Pelagospilus, Sargassococcus, Sungminbooa) and nine new species in the Sarcinochrysidales. We also described a new family, Chrysocystaceae, based upon molecular phylogenetic analyses.

Introduction

Sarcinochrysis marina Geitler was first described in 1930, and the cells were illustrated using a photomicrograph and several ink drawings (Geitler 1930). The genus was placed in the class Chrysophyceae even though Geitler pointed out that the unusual zoospores resembled the motile cells of brown algae and differed significantly from typical chrysophyte swimming cells. Forty-seven years later, based on electron microscopic observations of the zoospore, Gayral and Billard created the order Sarcinochrysidales (Chrysophyceae) (Gayral and Billard 1977a). The class Pelagophyceae was described (Andersen et al. 1993) and then based on molecular data, the Sarcinochrysidales was moved to the Pelagophyceae (Saunders et al. 1997). Additional molecular studies have corroborated the placement of Sarcinochrysis in the Pelagophyceae (e.g. Yang et al. 2011). The known diversity of the class is expanding, and a number of new generic names have been proposed for taxa belonging to the Sarcinochrysidales, e.g. Chrysocystis (Lobban et al. 1995), Aureoumbra (DeYoe et al. 1997), Chrysoreinhardia (Hoffmann et al. 2000), Aureoscheda (Wynne et al. 2014), Andersenia (Wetherbee et al. 2015).

During the original description, Geitler (1930) established two enrichment cultures from the type locality, Las Palmas in Canary Islands, Spain. He described Sarcina-type colonies, i.e. cubic packets of cells, and he showed that the cells had two deeply lobed chloroplasts and a new zoospore type. However, Geitler’s cultures no longer exist and cannot be investigated with modern methods. Subsequent studies attributed to Sarcinochrysis, are based on algae collected from other localities (e.g. Billard, 1974, Billard, 1984, Conrad and Kufferath, 1954, Gayral, 1972, West, 1969). However, the descriptions in the newer studies disagreed with Geitler’s description on some important points. For example, West (1969) didn’t observe a sarcinoid stage, Gayral (1972) described zoospores with only a single chloroplast, and Billard (1984) described chloroplasts without deep lobes and zoospores with a much shorter posteriorly directed flagellum. As a consequence of these differences, cultures identified as Sarcinochrysis and studied using molecular techniques (e.g. Saunders et al., 1997, Yang et al., 2011) seemed uncertain or even incorrect to represent Geitler’s organism.

The aims of this study are to (a) re-collect Sarcinochrysis marina from the type locality and establish a culture, (b) use molecular data to precisely identify the “true” S. marina on a phylogenetic tree, and (c) to re-evaluate the identity of culture strains that were previously named Sarcinochrysis. To achieve these goals, we collected new material from Geitler’s type locality. Several cultures were established and others were purchased; these were compared with Geitler’s observations. A culture that closely resembled Geitler’s description is included in molecular phylogenetic analyses using the nuclear encoded SSU rRNA and five plastid genes (psaA, psaB, psbA, psbC, and rbcL). Based on these results, we nomenclaturally anchor the name Sarcinochrysis marina and we describe four new genera and nine new species in the Sarcinochrysidales.

Section snippets

Taxonomy and Nomenclature


Sarcinochrysis marina Geitler (Fig. 1)

Lectotype here designated: Text fig. 12 in Geitler L. 1930. Archiv für Protistenkunde 69: p. 629.

Epitype here designated: cryopreserved culture strain BEA 0109B deposited in the Banco Español de Algas (BEA) located in Taliarte, Gran Canaria, Canary Islands, Spain.
Arachnochrysis gen nov. R.A.Andersen & K.Y.Han
Diagnosis: benthic colonial form; cells held by a thin gel visible only after staining; cells irregularly or randomly distributed; chloroplasts with

Discussion

The re-isolated culture of Sarcinochrysis marina from the type locality is the best possible source for representing this species because no biological type material exists. The organism described by Geitler (1930) had chloroplasts with finger-like lobes, which he described in detail. Until now, most reports of Sarcinochrysis were based on algae with plate-like chloroplasts under most or all conditions (e.g. Billard, 1984, West, 1969); in the text, Gayral (1972) described plastids in recently

Methods

A sample from the Canary Islands was collected on 29 September 2010 (27° 59′ 20″N, 15° 22′ 22″W) and four cultures were established (BEA 0109B, BEA 0110B, BEA 0111B, BEA 0112B). Another sample was collected on 1 November 2010 (28° 9′ 13″N, 15° 41′ 55″W), and one culture was established (BEA 0312B). A third sample was collected on 6 November 2010 (28°00′24.9″N 15°49′08.3″W), and a culture was established (BEA 0313B). The strains from the Canary Islands were isolated by one of us (MM) and the

Acknowledgements

We thank Dr. Richard Moe (University of California-Berkeley) for providing the correct Latin spellings for the new names and for suggesting the names Arachnochrysis and Pelagospilus. We also thank Prof. Dieter Müller for providing culture strain Chryso1 (now deposited as CCMP 3210), Prof. Frithjof Küpper for providing the Falkland Islands and Tierra de Fuego material, Dr. Jose Giner for his culture (CCMP 292) and Dr. Charles O'Kelly for his culture (CCMP 1664). We thank the curators of the BEA

References (33)

  • J. Ahn et al.

    Optimization of RNA purification method from Ecklonia cava Kjellman (Laminariales, Phaeophyceae)

    Algae

    (2004)
  • R.A. Andersen et al.

    Ultrastructure and 18S rRNA gene sequence for Pelagomonas calceolata gen. et sp. nov. and the description of a new algal class, the Pelagophyceae classis nov

    J Phycol

    (1993)
  • C. Billard

    Microantomie comparée de deux Chrysoméridacées Individualisation des Sarchinochrysidales au sein des Chrysophycées

    Bull Soc Phycol France

    (1974)
  • Billard C (1984) Recherches sur les Chrysophyceae marines de l’ordre des Sarcinochrysidales. Biologie, systématique,...
  • P. Bourrelly

    Les Algues d’Eau Douce. II. Les Algues jaunes et brunes

    (1968)
  • P. Bourrelly et al.

    Deux nouvelles espèces de Chrysophycées marines

    Rev Gén Bot

    (1953)
  • W. Conrad et al.

    Recherches sur les eaux saumâtres des environs de Lilloo. II

    Mém Inst R Sci Nat Belg

    (1954)
  • A. Derbès et al.

    Algues

  • A. Derbès et al.

    Mémoire sur quelques points de la physiologie des algues

    Supplément aux C R Hebd Seances Acad Sci

    (1856)
  • H.R. DeYoe et al.

    Description and characterization of the algal species Aureoumbra lagunensis gen. et sp. nov. and referral of Aureoumbra and Aureococcus to the Pelagophyceae

    J Phycol

    (1997)
  • P. Gayral

    Sur les Chrysophycées à zoïdes phéophycéens, notamment Sarcinochrysis marina Geitler

    Bull Soc Phycol France

    (1972)
  • P. Gayral et al.

    Synopsis du nouvel ordre des Sarcinochrysidales (Chrysophyceae)

    Taxon

    (1977)
  • P. Gayral et al.

    Chrysophycées et Haptophycées des côtes françaises: mise au point systématique et nouvelles observations sur Ruttnera chadefaudii Bourrelly et Magne (Haptophycées)

    Bull Soc Phycol France

    (1977)
  • P. Gayral et al.

    A survey of marine Chrysophyceae with special reference to the Sarcinochrysidales

  • P. Gayral et al.

    Observations nouvelles sur quatre Chrysophycées

    Bull Soc Phycol France

    (1969)
  • L. Geitler

    Ein grünes Filarplasmodium und andere neue Protisten

    Arch Protistenkd

    (1930)
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