RT Journal Article SR Electronic T1 PASCAR: a multiscale framework to explore the design space of constitutive and inducible CAR T cells JF Life Science Alliance JO Life Sci. Alliance FD Life Science Alliance LLC SP e202302171 DO 10.26508/lsa.202302171 VO 6 IS 10 A1 Rajakaruna, Harshana A1 Desai, Milie A1 Das, Jayajit YR 2023 UL https://www.life-science-alliance.org/content/6/10/e202302171.abstract AB CAR T cells are engineered to bind and destroy tumor cells by targeting overexpressed surface antigens. However, healthy cells expressing lower abundances of these antigens can also be lysed by CAR T cells. Various CAR T cell designs increase tumor cell elimination, whereas reducing damage to healthy cells. However, these efforts are costly and labor-intensive, constraining systematic exploration of potential hypotheses. We develop a protein abundance structured population dynamic model for CAR T cells (PASCAR), a framework that combines multiscale population dynamic models and multi-objective optimization approaches with data from cytometry and cytotoxicity assays to systematically explore the design space of constitutive and tunable CAR T cells. PASCAR can quantitatively describe in vitro and in vivo results for constitutive and inducible CAR T cells and can successfully predict experiments outside the training data. Our exploration of the CAR design space reveals that optimal CAR affinities in the intermediate range of dissociation constants effectively reduce healthy cell lysis, whereas maintaining high tumor cell-killing rates. Furthermore, our modeling offers guidance for optimizing CAR expressions in synthetic notch CAR T cells. PASCAR can be extended to other CAR immune cells.