RT Journal Article SR Electronic T1 The stabilized Pol31–Pol3 interface counteracts Pol32 ablation with differential effects on repair JF Life Science Alliance JO Life Sci. Alliance FD Life Science Alliance LLC SP e202101138 DO 10.26508/lsa.202101138 VO 4 IS 9 A1 Kenji Shimada A1 Monika Tsai-Pflugfelder A1 Niloofar Davoodi Vijeh Motlagh A1 Neda Delgoshaie A1 Jeannette Fuchs A1 Heinz Gut A1 Susan M Gasser YR 2021 UL https://www.life-science-alliance.org/content/4/9/e202101138.abstract AB DNA polymerase δ, which contains the catalytic subunit, Pol3, Pol31, and Pol32, contributes both to DNA replication and repair. The deletion of pol31 is lethal, and compromising the Pol3–Pol31 interaction domains confers hypersensitivity to cold, hydroxyurea (HU), and methyl methanesulfonate, phenocopying pol32Δ. We have identified alanine-substitutions in pol31 that suppress these deficiencies in pol32Δ cells. We characterize two mutants, pol31-T415A and pol31-W417A, which map to a solvent-exposed loop that mediates Pol31–Pol3 and Pol31–Rev3 interactions. The pol31-T415A substitution compromises binding to the Pol3 CysB domain, whereas Pol31-W417A improves it. Importantly, loss of Pol32, such as pol31-T415A, leads to reduced Pol3 and Pol31 protein levels, which are restored by pol31-W417A. The mutations have differential effects on recovery from acute HU, break-induced replication and trans-lesion synthesis repair pathways. Unlike trans-lesion synthesis and growth on HU, the loss of break-induced replication in pol32Δ cells is not restored by pol31-W417A, highlighting pathway-specific roles for Pol32 in fork-related repair. Intriguingly, CHIP analyses of replication forks on HU showed that pol32Δ and pol31-T415A indirectly destabilize DNA pol α and pol ε at stalled forks.