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More articles from Research Articles

  • <span class="sc">d</span>-amino acid oxidase promotes cellular senescence via the production of reactive oxygen species
    Open Access
    d-amino acid oxidase promotes cellular senescence via the production of reactive oxygen species

    Taiki Nagano, Shunsuke Yamao, Anju Terachi, Hidetora Yarimizu, Haruki Itoh, Ryoko Katasho, Kosuke Kawai, Akio Nakashima, Tetsushi Iwasaki, Ushio Kikkawa, Shinji Kamada

    Taiki Nagano ... Shinji Kamada

    Published 18 January 2019

    This study reveals a novel role of d-amino acid oxidase in promoting cellular senescence induced by genotoxic stresses via enzymatic generation of reactive oxygen species.

  • Rab1b and ARF5 are novel RNA-binding proteins involved in FMDV IRES–driven RNA localization
    Open Access
    Rab1b and ARF5 are novel RNA-binding proteins involved in FMDV IRES–driven RNA localization

    Javier Fernandez-Chamorro, Rosario Francisco-Velilla, Jorge Ramajo, Encarnación Martinez-Salas

    Javier Fernandez-Chamorro ... Encarnación Martinez-Salas

    Published 17 January 2019

    Integration of proteomic data with functional and imaging analysis revealed that Rab1b and ARF5, two ER-Golgi members, are RNA-binding proteins that colocalize with picornavirus IRES-RNA reporters in human cells.

  • KIF18A's neck linker permits navigation of microtubule-bound obstacles within the mitotic spindle
    Open Access
    KIF18A's neck linker permits navigation of microtubule-bound obstacles within the mitotic spindle

    Heidi LH Malaby, Dominique V Lessard, Christopher L Berger, Jason Stumpff

    Heidi LH Malaby ... Jason Stumpff

    Published 17 January 2019

    The length of KIF18A's neck linker permits navigation of obstacles along K-fibers within the mitotic spindle and is required for the timely alignment and segregation of mitotic chromosomes.

  • A junction coverage compatibility score to quantify the reliability of transcript abundance estimates and annotation catalogs
    Open Access
    A junction coverage compatibility score to quantify the reliability of transcript abundance estimates and annotation catalogs

    Charlotte Soneson, Michael I Love, Rob Patro, Shobbir Hussain, Dheeraj Malhotra, Mark D Robinson

    Charlotte Soneson ... Mark D Robinson

    Published 17 January 2019

    Comparison of observed exon–exon junction counts to those predicted from estimated transcript abundances can identify genes with misannotated or misquantified transcripts.

  • Evolution of gene expression levels in the male reproductive organs of <em>Anopheles</em> mosquitoes
    Open Access
    Evolution of gene expression levels in the male reproductive organs of Anopheles mosquitoes

    Abril Izquierdo, Martin Fahrenberger, Tania Persampieri, Mark Q Benedict, Tom Giles, Flaminia Catteruccia, Richard D Emes, Tania Dottorini

    Abril Izquierdo ... Tania Dottorini

    Published 2 January 2019

    Expression patterns of transcripts in reproductive tissues reveal the phylogeny of the An. gambiae complex and are indicative of molecular function, transcription regulatory networks, and protein–protein interaction networks.

  • Chemical genetic identification of GAK substrates reveals its role in regulating Na<sup>+</sup>/K<sup>+</sup>-ATPase
    Open Access
    Chemical genetic identification of GAK substrates reveals its role in regulating Na+/K+-ATPase

    Amy W Lin, Kalbinder K Gill, Marisol Sampedro Castañeda, Irene Matucci, Noreen Eder, Suzanne Claxton, Helen Flynn, Ambrosius P Snijders, Roger George, Sila K Ultanir

    Amy W Lin ... Sila K Ultanir

    Published 31 December 2018

    Novel GAK phosphorylation targets are identified using chemical genetic methods. One of the substrates is the α subunit of the Na+/K+-ATPase, phosphorylation of which is necessary for its surface trafficking from endosomes. Conserved functions of NAK family kinases are described.

  • Direct binding of Cdt2 to PCNA is important for targeting the CRL4<sup>Cdt2</sup> E3 ligase activity to Cdt1
    Open Access
    Direct binding of Cdt2 to PCNA is important for targeting the CRL4Cdt2 E3 ligase activity to Cdt1

    Akiyo Hayashi, Nickolaos Nikiforos Giakoumakis, Tatjana Heidebrecht, Takashi Ishii, Andreas Panagopoulos, Christophe Caillat, Michiyo Takahara, Richard G Hibbert, Naohiro Suenaga, Magda Stadnik-Spiewak, Tatsuro Takahashi, Yasushi Shiomi, Stavros Taraviras, Eleonore von Castelmur, Zoi Lygerou, Anastassis Perrakis, Hideo Nishitani

    Akiyo Hayashi ... Hideo Nishitani

    Published 31 December 2018

    The C-terminal end of Cdt2 contains a PIP box for binding to PCNA to promote CRL4Cdt2 function, creating a new paradigm where the substrate receptor and substrates bind to a common multivalent docking platform for ubiquitination.

  • Mechanistic aspects of maltotriose-conjugate translocation to the Gram-negative bacteria cytoplasm
    Open Access
    Mechanistic aspects of maltotriose-conjugate translocation to the Gram-negative bacteria cytoplasm

    Estelle Dumont, Julia Vergalli, Jelena Pajovic, Satya P Bhamidimarri, Koldo Morante, Jiajun Wang, Dmitrijs Lubriks, Edgars Suna, Robert A Stavenger, Mathias Winterhalter, Matthieu Réfrégiers, Jean-Marie Pagès

    Estelle Dumont ... Jean-Marie Pagès

    Published 28 December 2018

    A maltotriose-conjugate can deliver molecules into the cytoplasmic space of Gram-negative bacteria by parasitizing the maltose uptake pathway.

  • Polycomb and Notch signaling regulate cell proliferation potential during <em>Caenorhabditis elegans</em> life cycle
    Open Access
    Polycomb and Notch signaling regulate cell proliferation potential during Caenorhabditis elegans life cycle

    Francesca Coraggio, Ringo Püschel, Alisha Marti, Peter Meister

    Francesca Coraggio ... Peter Meister

    Published 26 December 2018

    Caenorhabditis elegans lineage is invariant between animals. By challenging cell fate in differentiated worms, an unexpected role of Polycomb and Notch signaling in the control of cell proliferation was uncovered, suggesting that the lineage is more flexible than believed.

  • A C/EBPα–Wnt connection in gut homeostasis and carcinogenesis
    Open Access
    A C/EBPα–Wnt connection in gut homeostasis and carcinogenesis

    Julian Heuberger, Undine Hill, Susann Förster, Karin Zimmermann, Victoria Malchin, Anja A Kühl, Ulrike Stein, Michael Vieth, Walter Birchmeier, Achim Leutz

    Julian Heuberger ... Achim Leutz

    Published 26 December 2018

    This research reveals an antagonism between C/EBPα expression and activated Wnt signaling in the human and mouse gut and suggests a tumor suppressor function of C/EBPα in human and murine intestinal cancer.

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