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Gastric cancer genomics study using reference human pangenomes

View ORCID ProfileDu Jiao, Xiaorui Dong, Shiyu Fan, View ORCID ProfileXinyi Liu, View ORCID ProfileYingyan Yu  Correspondence email, View ORCID ProfileChaochun Wei  Correspondence email
Du Jiao
1Department of Bioinformatics and Biostatistics, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, China
Roles: Software, Formal analysis, Validation, Investigation, Visualization, Methodology, Writing—original draft
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  • ORCID record for Du Jiao
Xiaorui Dong
1Department of Bioinformatics and Biostatistics, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, China
Roles: Software, Formal analysis, Validation, Investigation, Visualization, Methodology
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Shiyu Fan
1Department of Bioinformatics and Biostatistics, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, China
Roles: Data curation, Software, Formal analysis, Validation, Investigation, Methodology
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Xinyi Liu
1Department of Bioinformatics and Biostatistics, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, China
Roles: Data curation, Formal analysis, Investigation, Methodology
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  • ORCID record for Xinyi Liu
Yingyan Yu
2Department of General Surgery of Ruijin Hospital, Shanghai Institute of Digestive Surgery, and Shanghai Key Laboratory for Gastric Neoplasms, Shanghai Jiao Tong University School of Medicine, Shanghai, China
Roles: Conceptualization, Supervision, Funding acquisition, Investigation, Methodology, Writing—original draft, Project administration, Writing—review and editing
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  • ORCID record for Yingyan Yu
  • For correspondence: yingyan3y@sjtu.edu.cn
Chaochun Wei
1Department of Bioinformatics and Biostatistics, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, China
Roles: Conceptualization, Formal analysis, Supervision, Funding acquisition, Investigation, Visualization, Methodology, Writing—original draft, Project administration, Writing—review and editing
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  • ORCID record for Chaochun Wei
  • For correspondence: ccwei@sjtu.edu.cn
Published 27 January 2025. DOI: 10.26508/lsa.202402977
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Article Information

vol. 8 no. 4 e202402977
DOI 
https://doi.org/10.26508/lsa.202402977
PubMed 
39870503

Published By 
Life Science Alliance
Online ISSN 
2575-1077
History 
  • Received August 2, 2024
  • Revision received January 16, 2025
  • Accepted January 16, 2025
  • Published online January 27, 2025.

Copyright & Usage 
© 2025 Jiao et al. This article is available under a Creative Commons License (Attribution 4.0 International, as described at https://creativecommons.org/licenses/by/4.0/).

Author Information

  1. Du Jiao1, Software, Formal analysis, Validation, Investigation, Visualization, Methodology, Writing—original draft,
  2. Xiaorui Dong1, Software, Formal analysis, Validation, Investigation, Visualization, Methodology,
  3. Shiyu Fan1, Data curation, Software, Formal analysis, Validation, Investigation, Methodology,
  4. Xinyi Liu1, Data curation, Formal analysis, Investigation, Methodology,
  5. Yingyan Yu2,*⇑, Conceptualization, Supervision, Funding acquisition, Investigation, Methodology, Writing—original draft, Project administration, Writing—review and editing and
  6. Chaochun Wei1,*⇑, Conceptualization, Formal analysis, Supervision, Funding acquisition, Investigation, Visualization, Methodology, Writing—original draft, Project administration, Writing—review and editing
  1. 1Department of Bioinformatics and Biostatistics, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, China
  2. 2Department of General Surgery of Ruijin Hospital, Shanghai Institute of Digestive Surgery, and Shanghai Key Laboratory for Gastric Neoplasms, Shanghai Jiao Tong University School of Medicine, Shanghai, China
  1. Correspondence: yingyan3y{at}sjtu.edu.cn
  2. ccwei{at}sjtu.edu.cn
View Full Text

Funding

  • MOST | National Natural Science Foundation of China (NSFC)

    32170643, 82072602, 81772505, 81572955
    Y Yu, C Wei
  • Science and Technology Commission of Shanghai Municipality (STCSM)

    20DZ2201900, 18411953100, 22ZR1433600, 20ZR1428200
    Y Yu, C Wei
  • National Key Research and Development Program of China

    2017YFC0908300, 2016YFC1303200, 2018YFC0910500, 2023YFF1001600
    Y Yu, C Wei
  • Innovation Foundation of Translational Medicine of Shanghai Jiao Tong University School of Medicine

    TM202001, 15ZH4001, TM201617, TM201702
    Y Yu
  • Shanghai Key Program of Computational Biology

    24JS2840300, 23JS1400800
    C Wei
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Pangenome-based disease genomics
Du Jiao, Xiaorui Dong, Shiyu Fan, Xinyi Liu, Yingyan Yu, Chaochun Wei
Life Science Alliance Jan 2025, 8 (4) e202402977; DOI: 10.26508/lsa.202402977

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Pangenome-based disease genomics
Du Jiao, Xiaorui Dong, Shiyu Fan, Xinyi Liu, Yingyan Yu, Chaochun Wei
Life Science Alliance Jan 2025, 8 (4) e202402977; DOI: 10.26508/lsa.202402977
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Volume 8, No. 4
April 2025
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