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A network embedding approach to identify active modules in biological interaction networks

View ORCID ProfileClaude Pasquier  Correspondence email, Vincent Guerlais, View ORCID ProfileDenis Pallez, Raphaël Rapetti-Mauss, Olivier Soriani
Claude Pasquier
1Laboratoire d'Informatique, Signaux et Systèmes de Sophia-Antipolis, I3S - UMR7271 - UNS CNRS, Les Algorithmes - bât. Euclide B, Sophia Antipolis, France
Roles: Conceptualization, Data curation, Software, Supervision, Validation, Investigation, Visualization, Methodology, Writing—original draft, Writing—review and editing
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  • ORCID record for Claude Pasquier
  • For correspondence: claude.pasquier@univ-cotedazur.fr
Vincent Guerlais
1Laboratoire d'Informatique, Signaux et Systèmes de Sophia-Antipolis, I3S - UMR7271 - UNS CNRS, Les Algorithmes - bât. Euclide B, Sophia Antipolis, France
Roles: Data curation, Software, Visualization
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Denis Pallez
1Laboratoire d'Informatique, Signaux et Systèmes de Sophia-Antipolis, I3S - UMR7271 - UNS CNRS, Les Algorithmes - bât. Euclide B, Sophia Antipolis, France
Roles: Validation, Investigation, Visualization, Methodology, Writing—original draft, Writing—review and editing
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  • ORCID record for Denis Pallez
Raphaël Rapetti-Mauss
2iBV - Institut de Biologie Valrose, Université Nice Sophia Antipolis, Faculté des Sciences, Parc Valrose, Nice cedex 2, France
Roles: Resources, Investigation, Visualization, Methodology, Writing—original draft, Writing—review and editing
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Olivier Soriani
2iBV - Institut de Biologie Valrose, Université Nice Sophia Antipolis, Faculté des Sciences, Parc Valrose, Nice cedex 2, France
Roles: Conceptualization, Resources, Supervision, Validation, Investigation, Visualization, Methodology, Writing—original draft, Writing—review and editing
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Published 20 June 2023. DOI: 10.26508/lsa.202201550
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Article Information

vol. 6 no. 9 e202201550
DOI 
https://doi.org/10.26508/lsa.202201550
PubMed 
37339804

Published By 
Life Science Alliance
Online ISSN 
2575-1077
History 
  • Received June 7, 2022
  • Revision received June 6, 2023
  • Accepted June 6, 2023
  • Published online June 20, 2023.

Copyright & Usage 
© 2023 Pasquier et al. This article is available under a Creative Commons License (Attribution 4.0 International, as described at https://creativecommons.org/licenses/by/4.0/).

Author Information

  1. Claude Pasquier1, Conceptualization, Data curation, Software, Supervision, Validation, Investigation, Visualization, Methodology, Writing—original draft, Writing—review and editing⇑,
  2. Vincent Guerlais1, Data curation, Software, Visualization,
  3. Denis Pallez1, Validation, Investigation, Visualization, Methodology, Writing—original draft, Writing—review and editing,
  4. Raphaël Rapetti-Mauss2, Resources, Investigation, Visualization, Methodology, Writing—original draft, Writing—review and editing and
  5. Olivier Soriani2, Conceptualization, Resources, Supervision, Validation, Investigation, Visualization, Methodology, Writing—original draft, Writing—review and editing
  1. 1Laboratoire d'Informatique, Signaux et Systèmes de Sophia-Antipolis, I3S - UMR7271 - UNS CNRS, Les Algorithmes - bât. Euclide B, Sophia Antipolis, France
  2. 2iBV - Institut de Biologie Valrose, Université Nice Sophia Antipolis, Faculté des Sciences, Parc Valrose, Nice cedex 2, France
  1. Correspondence: claude.pasquier{at}univ-cotedazur.fr
View Full Text

Funding

  • Agence Nationale de la Recherche (ANR)

    ANR-15-IDEX-01
    C Pasquier, D Pallez, R Rapetti-Mauss, O Soriani
  • Agence Nationale de la Recherche (ANR)

    ANR-11-LABX-0028-01
    C Pasquier, D Pallez, R Rapetti-Mauss, O Soriani
  • Ligue Contre le Cancer (French League Against Cancer)

    GB/MA/IQ-10607
    R Rapetti-Mauss
  • Fondation ARC pour la Recherche sur le Cancer (ARC)

    PJA 2016 120 4740
    O Soriani
  • Fondation ARC pour la Recherche sur le Cancer (ARC)

    PJA 2019 120 9546
    O Soriani
  • Fondation ARC pour la Recherche sur le Cancer (ARC)

    PJA 2018 207701
    R Rapetti-Mauss
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Network embedding for functional modules detection
Claude Pasquier, Vincent Guerlais, Denis Pallez, Raphaël Rapetti-Mauss, Olivier Soriani
Life Science Alliance Jun 2023, 6 (9) e202201550; DOI: 10.26508/lsa.202201550

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Network embedding for functional modules detection
Claude Pasquier, Vincent Guerlais, Denis Pallez, Raphaël Rapetti-Mauss, Olivier Soriani
Life Science Alliance Jun 2023, 6 (9) e202201550; DOI: 10.26508/lsa.202201550
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Volume 6, No. 9
September 2023
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