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Table of Contents

March 2022 | Volume 5, No. 3

Research Articles

  • Transcriptomics reveals immune-metabolism disorder in acute-on-chronic liver failure in rats
    Open Access
    Transcriptomics reveals immune-metabolism disorder in acute-on-chronic liver failure in rats

    Hozeifa M Hassan, Qun Cai, Xi Liang, Jiaojiao Xin, Keke Ren, Jing Jiang, Dongyan Shi, Yingyan Lu, Tan Li, Yuxin Shang, Lulu He, Xi Chen, Suwan Sun, Peng Li, Beibei Guo, Jiaxian Chen, Hui Yang, Wen Hu, Xin Chen, Jun Li

    Hozeifa M Hassan ... Jun Li

    Published 1 December 2021

    Liver tissue transcriptomics of liver cirrhosis (LC)–based acute-on-chronic liver failure (ACLF) rats reveal immune-metabolism disorder as the core mechanism underlying ACLF development and prognosis.

  • Bis-choline tetrathiomolybdate prevents copper-induced blood–brain barrier damage
    Open Access
    Bis-choline tetrathiomolybdate prevents copper-induced blood–brain barrier damage

    Sabine Borchard, Stefanie Raschke, Krzysztof M Zak, Carola Eberhagen, Claudia Einer, Elisabeth Weber, Sandra M Müller, Bernhard Michalke, Josef Lichtmannegger, Albrecht Wieser, Tamara Rieder, Grzegorz M Popowicz, Jerzy Adamski, Martin Klingenspor, Andrew H Coles, Ruth Viana, Mikkel H Vendelbo, Thomas D Sandahl, Tanja Schwerdtle, Thomas Plitz, Hans Zischka

    Sabine Borchard ... Hans Zischka

    Published 2 December 2021

    The blood–brain barrier endothelial cell monolayer becomes permeable to elevated copper loosely bound to albumin, which can be avoided by a high-affinity copper chelator but not by D-penicillamine.

  • Artemisinin-independent inhibitory activity of <em>Artemisia</em> sp. infusions against different <em>Plasmodium</em> stages including relapse-causing hypnozoites
    Open Access
    Artemisinin-independent inhibitory activity of Artemisia sp. infusions against different Plasmodium stages including relapse-causing hypnozoites

    Kutub Ashraf, Shahin Tajeri, Christophe-Sébastien Arnold, Nadia Amanzougaghene, Jean-François Franetich, Amélie Vantaux, Valérie Soulard, Mallaury Bordessoulles, Guillaume Cazals, Teun Bousema, Geert-Jan van Gemert, Roger Le Grand, Nathalie Dereuddre-Bosquet, Jean-Christophe Barale, Benoit Witkowski, Georges Snounou, Romain Duval, Cyrille Y Botté, Dominique Mazier

    Kutub Ashraf ... Dominique Mazier

    Published 2 December 2021

    Infusions from two Artemisia species, one containing artemisinin, the other not, equally inhibit pre-erythrocytic and erythrocytic stages of different Plasmodium species, including two relapsing species.

  • Exosomes/microvesicles target SARS-CoV-2 via innate and RNA-induced immunity with PIWI-piRNA system
    Open Access
    Exosomes/microvesicles target SARS-CoV-2 via innate and RNA-induced immunity with PIWI-piRNA system

    Shoeb Ikhlas, Afia Usman, Dongkyeong Kim, Dongsheng Cai

    Shoeb Ikhlas ... Dongsheng Cai

    Published 3 December 2021

    Murine neural stem cell exosomes/microvesicles can work to reduce SARS-CoV-2, an effect that can be adaptively enhanced via viral RNA fragment stimulation, which requires the PIWI-piRNA system.

  • β-arrestin1 promotes tauopathy by transducing GPCR signaling, disrupting microtubules and autophagy
    Open Access
    β-arrestin1 promotes tauopathy by transducing GPCR signaling, disrupting microtubules and autophagy

    Jung-AA Woo, Yan Yan, Teresa R Kee, Sara Cazzaro, Kyle C McGill Percy, Xinming Wang, Tian Liu, Stephen B Liggett, David E Kang

    Jung-AA Woo ... David E Kang

    Published 3 December 2021

    GPCRs regulator, β-arrestin1, is increased in FTLD-tau patients, is required for β2-adrenergic receptor and metabotropic glutamate receptor 2-induced tau phosphorylation, promotes tau aggregation by impairing autophagy, and destabilizes microtubule dynamics, whereas genetic reduction in β-arrestin1 mitigates tauopathy and cognitive impairments.

  • Loss of SET1/COMPASS methyltransferase activity reduces lifespan and fertility in <em>Caenorhabditis elegans</em>
    Open Access
    Loss of SET1/COMPASS methyltransferase activity reduces lifespan and fertility in Caenorhabditis elegans

    Matthieu Caron, Loïc Gely, Steven Garvis, Annie Adrait, Yohann Couté, Francesca Palladino, Paola Fabrizio

    Matthieu Caron ... Paola Fabrizio

    Published 10 December 2021

    Contrary to prior reports, this study shows that a loss of COMPASS components or SET1 activity reduces Caenorhabditis elegans lifespan, suggesting that as in yeast, H3K4 methylation is essential for normal longevity.

  • Fms-like tyrosine kinase 3 is a regulator of the cardiac side population in mice
    Open Access
    Fms-like tyrosine kinase 3 is a regulator of the cardiac side population in mice

    Giacomo Della Verde, Michika Mochizuki, Vera Lorenz, Julien Roux, Lifen Xu, Leandra Ramin-Wright, Otmar Pfister, Gabriela M Kuster

    Giacomo Della Verde ... Gabriela M Kuster

    Published 13 December 2021

    This work shows that Flt3 signaling regulates the composition and functionality of the cardiac side population, which could be relevant for cardiovascular homeostasis under Flt3-inhibitory therapies.

  • Loss of Nup210 results in muscle repair delays and age-associated alterations in muscle integrity
    Open Access
    Loss of Nup210 results in muscle repair delays and age-associated alterations in muscle integrity

    Stephen Sakuma, Ethan YS Zhu, Marcela Raices, Pan Zhang, Rabi Murad, Maximiliano A D’Angelo

    Stephen Sakuma ... Maximiliano A D’Angelo

    Published 15 December 2021

    This study describes the  the role of a nuclear pore complex protein in mammalian in skeletal muscle maintenance, repair, and function.

  • CNVs with adaptive potential in <em>Rangifer tarandus</em>: genome architecture and new annotated assembly
    Open Access
    CNVs with adaptive potential in Rangifer tarandus: genome architecture and new annotated assembly

    Julien Prunier, Alexandra Carrier, Isabelle Gilbert, William Poisson, Vicky Albert, Joëlle Taillon, Vincent Bourret, Steeve D Côté, Arnaud Droit, Claude Robert

    Julien Prunier ... Claude Robert

    Published 15 December 2021

    Next-generation sequencing of three caribou ecotypes aligned to a new annotated genome assembly revealed divergent CNVs, including genes with annotations in line with adaptation.

  • Amyloid-like aggregating proteins cause lysosomal defects in neurons via gain-of-function toxicity
    Open Access
    Amyloid-like aggregating proteins cause lysosomal defects in neurons via gain-of-function toxicity

    Irene Riera-Tur, Tillman Schäfer, Daniel Hornburg, Archana Mishra, Miguel da Silva Padilha, Lorena Fernández-Mosquera, Dennis Feigenbutz, Patrick Auer, Matthias Mann, Wolfgang Baumeister, Rüdiger Klein, Felix Meissner, Nuno Raimundo, Rubén Fernández-Busnadiego, Irina Dudanova

    Irene Riera-Tur ... Irina Dudanova

    Published 21 December 2021

    Using cryo-ET, cell biology, and proteomics, this study shows that aggregating proteins impair the autophagy-lysosomal pathway in neurons by sequestering a subunit of the AP-3 adaptor complex.

  • Poly(ADP-ribosyl)ating pathway regulates development from stem cell niche to longevity control
    Open Access
    Poly(ADP-ribosyl)ating pathway regulates development from stem cell niche to longevity control

    Guillaume Bordet, Elena Kotova, Alexei V Tulin

    Guillaume Bordet ... Alexei V Tulin

    Published 23 December 2021

    The phosphorylation of poly(ADP-risobyl) glycohydrolase is involved in stem-cells differentiation, embryonic/larval development, regulation of longevity and fertility by calorie restriction.

  • ADAR1 RNA editing regulates endothelial cell functions via the MDA-5 RNA sensing signaling pathway
    Open Access
    ADAR1 RNA editing regulates endothelial cell functions via the MDA-5 RNA sensing signaling pathway

    Xinfeng Guo, Silvia Liu, Rose Yan, Vy Nguyen, Mazen Zenati, Timothy R Billiar, Qingde Wang

    Xinfeng Guo ... Qingde Wang

    Published 30 December 2021

    Cellular RNA transcripts in endothelial cells, especially the SINE RNAs, need extensive editing by the A-to-I RNA editing enzyme ADAR1, which is essential for neonatal survival by regulating the MDA-5–mediated RNA-sensing signaling pathway.

  • Electron cryo-tomography structure of axonemal doublet microtubule from <em>Tetrahymena thermophila</em>
    Open Access
    Electron cryo-tomography structure of axonemal doublet microtubule from Tetrahymena thermophila

    Sam Li, Jose-Jesus Fernandez, Amy S Fabritius, David A Agard, Mark Winey

    Sam Li ... Mark Winey

    Published 30 December 2021

    By using electron cryo-tomography and subtomogram average, this study reveals the assembly of T. thermophila axonemal MT doublet in wild type and mutant, showing its structure conservation and diversity compared to other organisms.

  • Necrotic debris and STING exert therapeutically relevant effects on tumor cholesterol homeostasis
    Open Access
    Necrotic debris and STING exert therapeutically relevant effects on tumor cholesterol homeostasis

    Sampath Katakam, Santosh Anand, Patricia Martin, Nicolo Riggi, Ivan Stamenkovic

    Sampath Katakam ... Ivan Stamenkovic

    Published 4 January 2022

    Necrotic debris and STING affect tumor cell growth by altering cholesterol homeostasis in opposing manner, revealing that modulation of cellular cholesterol load may help control tumor growth.

Resources

  • Nonsense-mediated mRNA decay uses complementary mechanisms to suppress mRNA and protein accumulation
    Open Access
    Nonsense-mediated mRNA decay uses complementary mechanisms to suppress mRNA and protein accumulation

    Dylan B Udy, Robert K Bradley

    Dylan B Udy ... Robert K Bradley

    Published 8 December 2021

    A reporter system for quantitative measurements of NMD-sensitive mRNA and protein levels in mammalian cells shows that NMD suppresses protein levels to a greater degree than RNA levels.

  • Generation of human long-lived plasma cells by developmentally regulated epigenetic imprinting
    Open Access
    Generation of human long-lived plasma cells by developmentally regulated epigenetic imprinting

    Chester J Joyner, Ariel M Ley, Doan C Nguyen, Mohammad Ali, Alessia Corrado, Christopher Tipton, Christopher D Scharer, Tian Mi, Matthew C Woodruff, Jennifer Hom, Jeremy M Boss, Meixue Duan, Greg Gibson, Danielle Roberts, Joel Andrews, Sagar Lonial, Inaki Sanz, F Eun-Hyung Lee

    Chester J Joyner ... F Eun-Hyung Lee

    Published 24 December 2021

    This study shows that the generation of human long-lived plasma cells requires blood antibody secreting cells to undergo epigenetic and transcriptional reprogramming in response to the bone marrow microniche to become apoptosis resistant and survive to secrete antibodies for a lifetime.

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Volume 5, No. 3
March 2022
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