A FIJI macro for quantifying pattern in extracellular matrix

Esther Wershof; Danielle Park; David J Barry; Robert P Jenkins; Antonio Rullan; Anna Wilkins; Karin Schlegelmilch; Ioannis Roxanis; Kurt I Anderson; Paul A Bates; Erik Sahai

doi:10.26508/lsa.202000880

Methods

Open Access

A FIJI macro for quantifying pattern in extracellular matrix

Esther Wershof, Danielle Park, View ORCID ProfileDavid J Barry, Robert P Jenkins, View ORCID ProfileAntonio Rullan, Anna Wilkins, Karin Schlegelmilch, Ioannis Roxanis, Kurt I Anderson, View ORCID ProfilePaul A Bates Correspondence email, View ORCID ProfileErik Sahai Correspondence email

Esther Wershof

1Biomolecular Modelling Laboratory, The Francis Crick Institute, London, UK

2Tumour Cell Biology Laboratory, The Francis Crick Institute, London, UK

3Sloan Kettering Institute, Memorial Sloan Kettering Cancer Center, New York City, NY, USA

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

Danielle Park

4Developmental Signalling Laboratory, The Francis Crick Institute, London, UK

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

David J Barry

5Advanced Light Microscopy Facility, The Francis Crick Institute, London, UK

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site
ORCID record for David J Barry

Robert P Jenkins

2Tumour Cell Biology Laboratory, The Francis Crick Institute, London, UK

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

Antonio Rullan

2Tumour Cell Biology Laboratory, The Francis Crick Institute, London, UK

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site
ORCID record for Antonio Rullan

Anna Wilkins

2Tumour Cell Biology Laboratory, The Francis Crick Institute, London, UK

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

Karin Schlegelmilch

2Tumour Cell Biology Laboratory, The Francis Crick Institute, London, UK

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

Ioannis Roxanis

6Breast Cancer Research Division, Toby Robins Breast Cancer Now Research Centre, The Institute of Cancer Research, London, UK

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

Kurt I Anderson

5Advanced Light Microscopy Facility, The Francis Crick Institute, London, UK

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

Paul A Bates

1Biomolecular Modelling Laboratory, The Francis Crick Institute, London, UK

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site
ORCID record for Paul A Bates
For correspondence: paul.bates@crick.ac.uk

Erik Sahai

2Tumour Cell Biology Laboratory, The Francis Crick Institute, London, UK

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site
ORCID record for Erik Sahai
For correspondence: erik.sahai@crick.ac.uk

Published 27 January 2021. DOI: 10.26508/lsa.202000880

Article
Figures & Data
Info
Metrics
Reviewer Comments
PDF

Statistics from Altmetric.com

Article usage

Article usage: January 2021 to March 2023

	Abstract	Full	Pdf
Jan 2021	49	950	231
Feb 2021	38	912	453
Mar 2021	79	721	179
Apr 2021	16	348	131
May 2021	11	396	95
Jun 2021	18	299	85
Jul 2021	13	225	65
Aug 2021	19	177	60
Sep 2021	15	249	110
Oct 2021	19	248	134
Nov 2021	15	234	85
Dec 2021	19	163	94
Jan 2022	20	221	73
Feb 2022	19	249	154
Mar 2022	25	246	185
Apr 2022	18	284	129
May 2022	26	228	101
Jun 2022	27	276	107
Jul 2022	25	208	83
Aug 2022	13	180	60
Sep 2022	13	187	86
Oct 2022	13	196	76
Nov 2022	12	192	110
Dec 2022	10	112	41
Jan 2023	8	276	88
Feb 2023	15	193	88
Mar 2023	19	178	59

Cited By...

27 Citations
Google Scholar

PreviousNext

Download PDF

Article Alerts

User Name *

Password *

Email *

Email Article

Thank you for your interest in spreading the word on Life Science Alliance.

NOTE: We only request your email address so that the person you are recommending the page to knows that you wanted them to see it, and that it is not junk mail. We do not capture any email address.

Your Email *

Your Name *

Send To *

Enter multiple addresses on separate lines or separate them with commas.

You are going to email the following A FIJI macro for quantifying pattern in extracellular matrix

Message Subject (Your Name) has sent you a message from Life Science Alliance

Message Body (Your Name) thought you would like to see the Life Science Alliance web site.

Your Personal Message

CAPTCHA

This question is for testing whether or not you are a human visitor and to prevent automated spam submissions.

Citation Tools

A FIJI macro for quantifying fibrillar patterns

Esther Wershof, Danielle Park, David J Barry, Robert P Jenkins, Antonio Rullan, Anna Wilkins, Karin Schlegelmilch, Ioannis Roxanis, Kurt I Anderson, Paul A Bates, Erik Sahai

Life Science Alliance Jan 2021, 4 (3) e202000880; DOI: 10.26508/lsa.202000880

Citation Manager Formats

BibTeX
Bookends
EasyBib
EndNote (tagged)
EndNote 8 (xml)
Medlars
Mendeley
Papers
RefWorks Tagged
Ref Manager
RIS
Zotero

A FIJI macro for quantifying fibrillar patterns

Esther Wershof, Danielle Park, David J Barry, Robert P Jenkins, Antonio Rullan, Anna Wilkins, Karin Schlegelmilch, Ioannis Roxanis, Kurt I Anderson, Paul A Bates, Erik Sahai

Life Science Alliance Jan 2021, 4 (3) e202000880; DOI: 10.26508/lsa.202000880

Share This Article:

Tweet Widget
Facebook Like

In this Issue

Volume 4, No. 3

March 2021

Table of Contents
Cover (PDF)
About the Cover
Masthead (PDF)

Jump to section

Article
Figures & Data
Info
Metrics
Reviewer Comments
PDF

Subjects

Cancer
Methods & Resources

No related articles found.

Cited By...

A WORKFLOW FOR RAPID UNBIASED QUANTIFICATION OF FIBRILLAR FEATURE ALIGNMENT IN BIOLOGICAL IMAGES

Google Scholar

Main menu

User menu

Search

A FIJI macro for quantifying pattern in extracellular matrix

Statistics from Altmetric.com

Article usage

Article usage: January 2021 to March 2023

Cited By...

Citation Manager Formats

In this Issue

Subjects

Related Articles

Cited By...

More in this TOC Section

Similar Articles

Content

For Authors

Other Services

More Information