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The uncharacterized protein FAM47E interacts with PRMT5 and regulates its functions

Baskar Chakrapani, Mohd Imran K Khan, Rajashekar Varma Kadumuri, Somlee Gupta, Mamta Verma, Sharad Awasthi, Gayathri Govindaraju, Arun Mahesh, Arumugam Rajavelu, View ORCID ProfileSreenivas Chavali  Correspondence email, View ORCID ProfileArunkumar Dhayalan  Correspondence email
Baskar Chakrapani
1Department of Biotechnology, Pondicherry University, Puducherry, India
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Mohd Imran K Khan
1Department of Biotechnology, Pondicherry University, Puducherry, India
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Rajashekar Varma Kadumuri
2Department of Biology, Indian Institute of Science Education and Research (IISER) Tirupati, Tirupati, India
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Somlee Gupta
1Department of Biotechnology, Pondicherry University, Puducherry, India
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Mamta Verma
1Department of Biotechnology, Pondicherry University, Puducherry, India
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Sharad Awasthi
1Department of Biotechnology, Pondicherry University, Puducherry, India
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Gayathri Govindaraju
3Interdisciplinary Biology, Rajiv Gandhi Centre for Biotechnology, Trivandrum, India
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Arun Mahesh
1Department of Biotechnology, Pondicherry University, Puducherry, India
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Arumugam Rajavelu
3Interdisciplinary Biology, Rajiv Gandhi Centre for Biotechnology, Trivandrum, India
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Sreenivas Chavali
2Department of Biology, Indian Institute of Science Education and Research (IISER) Tirupati, Tirupati, India
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  • ORCID record for Sreenivas Chavali
  • For correspondence: schavali@iisertirupati.ac.in
Arunkumar Dhayalan
1Department of Biotechnology, Pondicherry University, Puducherry, India
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  • ORCID record for Arunkumar Dhayalan
  • For correspondence: arun.dbt@pondiuni.edu.in
Published 29 December 2020. DOI: 10.26508/lsa.202000699
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Abstract

Protein arginine methyltransferase 5 (PRMT5) symmetrically dimethylates arginine residues in various proteins affecting diverse cellular processes such as transcriptional regulation, splicing, DNA repair, differentiation, and cell cycle. Elevated levels of PRMT5 are observed in several types of cancers and are associated with poor clinical outcomes, making PRMT5 an important diagnostic marker and/or therapeutic target for cancers. Here, using yeast two-hybrid screening, followed by immunoprecipitation and pull-down assays, we identify a previously uncharacterized protein, FAM47E, as an interaction partner of PRMT5. We report that FAM47E regulates steady-state levels of PRMT5 by affecting its stability through inhibition of its proteasomal degradation. Importantly, FAM47E enhances the chromatin association and histone methylation activity of PRMT5. The PRMT5–FAM47E interaction affects the regulation of PRMT5 target genes expression and colony-forming capacity of the cells. Taken together, we identify FAM47E as a protein regulator of PRMT5, which promotes the functions of this versatile enzyme. These findings imply that disruption of PRMT5–FAM47E interaction by small molecules might be an alternative strategy to attenuate the oncogenic function(s) of PRMT5.

  • Received March 13, 2020.
  • Revision received December 18, 2020.
  • Accepted December 18, 2020.
  • © 2020 Chakrapani et al.
Creative Commons logoCreative Commons logohttps://creativecommons.org/licenses/by/4.0/

This article is available under a Creative Commons License (Attribution 4.0 International, as described at https://creativecommons.org/licenses/by/4.0/).

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FAM47E interacts and regulates PRMT5
Baskar Chakrapani, Mohd Imran K Khan, Rajashekar Varma Kadumuri, Somlee Gupta, Mamta Verma, Sharad Awasthi, Gayathri Govindaraju, Arun Mahesh, Arumugam Rajavelu, Sreenivas Chavali, Arunkumar Dhayalan
Life Science Alliance Dec 2020, 4 (3) e202000699; DOI: 10.26508/lsa.202000699

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FAM47E interacts and regulates PRMT5
Baskar Chakrapani, Mohd Imran K Khan, Rajashekar Varma Kadumuri, Somlee Gupta, Mamta Verma, Sharad Awasthi, Gayathri Govindaraju, Arun Mahesh, Arumugam Rajavelu, Sreenivas Chavali, Arunkumar Dhayalan
Life Science Alliance Dec 2020, 4 (3) e202000699; DOI: 10.26508/lsa.202000699
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Volume 4, No. 3
March 2021
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