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Research Article
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TRAP1 chaperone protein mutations and autoinflammation

View ORCID ProfileAriane SI Standing  Correspondence email, Ying Hong, View ORCID ProfileCoro Paisan-Ruiz, Ebun Omoyinmi, Alan Medlar, Horia Stanescu, Robert Kleta, Dorota Rowcenzio, Philip Hawkins, Helen Lachmann, View ORCID ProfileMichael F McDermott, Despina Eleftheriou, Nigel Klein, Paul A Brogan
Ariane SI Standing
1University College London and Great Ormond Street Institute of Child Health, London, UK
2The Natural History Museum, London, UK
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  • ORCID record for Ariane SI Standing
  • For correspondence: ariane.standing@ucl.ac.uk
Ying Hong
1University College London and Great Ormond Street Institute of Child Health, London, UK
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Coro Paisan-Ruiz
3Department of Neurology, Icahn School of Medicine at Mount Sinai, New York City, NY, USA
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Ebun Omoyinmi
1University College London and Great Ormond Street Institute of Child Health, London, UK
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Alan Medlar
4University College London Division of Medicine, London, UK
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Horia Stanescu
4University College London Division of Medicine, London, UK
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Robert Kleta
4University College London Division of Medicine, London, UK
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Dorota Rowcenzio
5National Amyloidosis Centre and Royal Free Hospital, London, UK
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Philip Hawkins
5National Amyloidosis Centre and Royal Free Hospital, London, UK
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Helen Lachmann
5National Amyloidosis Centre and Royal Free Hospital, London, UK
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Michael F McDermott
6Leeds Institute of Rheumatic and Musculoskeletal Medicine, St James’s University Hospital, Leeds, UK
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  • ORCID record for Michael F McDermott
Despina Eleftheriou
1University College London and Great Ormond Street Institute of Child Health, London, UK
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Nigel Klein
1University College London and Great Ormond Street Institute of Child Health, London, UK
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Paul A Brogan
1University College London and Great Ormond Street Institute of Child Health, London, UK
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Published 27 December 2019. DOI: 10.26508/lsa.201900376
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    Figure 1. Clinical phenotype and response to treatment.

    (A) Recurrent nasal inflammation resulting in cartilaginous nasal septal collapse and “saddle nose deformity” in the index case IV-1. (B) chronic ulceration of the hard palate leading to scarring (IV-1). Biopsy of mucosal ulcers revealed neutrophilic infiltration (see Table S1 for full histological descriptions). (C) ulcers also affected the lips causing scarring (IV-1). Note also the nasogastric feeding tube required for nutritional support for failure to thrive. (D) erythematous rash on upper arm (IV-1). (E, F, G) Sterile multifocal osteomyelitis in Patient IV-4, resulting in expansion and lytic inflammation in the medial end of the left clavicle (E) (arrowed), and of (F) distal femur (arrowed), and multiple cervical vertebra, as depicted in (G) showing a computer tomography scan of a cervical vertebra with lytic lesions (arrowed). Cervical myelopathy from vertebral collapse was the cause of death in Patient IV-4. (H) Family pedigree showing status of TRAP1 mutation and the linked MEFV pathological variants. (I) Acute phase reactants plotted against treatments in IV-1, and IV-2, black line denotes C reactive protein, red lines serum amyloid A. WT, wild-type; HSCT, haematopoietic stem cell transplantation.

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    Figure 2. Flow cytometric and electron spin resonance detection of reactive oxygen species.

    PBMCs isolated from patient 4 (see main text) and 3 healthy controls (HC) were stained for 15 min with 5 μM MitoSox or 10 μM DHE and analysed immediately by flow cytometry. Dotted lines in (A, B, C, D) denote HC (one representative experiment); red lines denote patient 4. (A, B) Mitochondrial oxide in monocytes (A) showed no significant difference, but (B) was increased in lymphocytes from patient 4 (***P < 0.001, two-tailed Z-test). (C, D) Oxidative stress detected by H2DCFDA was elevated in both patient monocytes (C) and lymphocytes (D). Fig 2E–H: 500,000 THP1 cells were seeded into a 24-well plate with 100 nM PMA. After 24 h, the medium was replaced and lipofectamine and siRNA complexes were added. After a further 24 h, the medium was replaced with RPMI with 2% FCS for another 24 h. (E, F, G, H) Cells were then trypsinized and either stained for 15 min with 5 μM MitoSox (E), 10 μM DHE (F), or 10 μM H2DCFDA (H) and analysed immediately by flow cytometry; or the cells were resuspended in antioxidant buffer, spin probe CMH was then added, and superoxide production was measured 10 times over 10 min via electron spin resonance spectroscopy (G). Cytoplasmic superoxide was significantly increased in MEFV knockdown (kd) cells compared with scrambled control. Mitochondrial superoxide, superoxide production, and oxidative stress levels were significantly increased in the TRAP1 kd cells. (I) THP1 cells were transfected with full-length C-terminal DDK-tagged TRAP1 in a pCMV6-Entry vector, with either wild-type TRAP1 sequence or with the same point mutation inducing the p.R128H protein change or the empty vector alone. 500,000 THP1 cells were seeded into a 24-well plate in RPMI with 10% FCS and 100 nM PMA overnight. Relevant wells were treated with 5 μM CCCP for 6 h. The cells were then stained with 5 μM MitoSox, trypsinized, and analysed immediately by flow cytometry. At baseline, MitoSox fluorescence was slightly but significantly decreased in only the WT-TRAP1 overexpressing cells compared with the vector control. Upon treatment with CCCP, mitochondrial superoxide increased in vector control and R128H mutant TRAP1, but to a significantly lesser extent in the WT-TRAP1 cells. kd, knockdown; WT, wild-type.

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    Figure S1. MEFV and TRAP1 protein was reduced in THP1 cells transfected with siRNA.

    500,000 THP1 cells were seeded into each well of a 24-well plate with 100 nM PMA. After 24 h, the media was changed and transfection complexes with siRNA were added. After a further 24 h, the media was replaced with RPMI and 2% FCS. After another 24 h, protein was extracted with radioimmunoprecipitation assay (RIPA) buffer. Relative protein levels were quantified using Western blot and densitometry and normalised to the scrambled control. Levels of both proteins were reduced by more than half. Left: relative MEFV levels (P = 0.016, two-tailed unpaired t test) Right: relative TRAP1 levels (P = 0.0007, two-tailed unpaired t test).

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    Figure 3. XBP1 splicing and TRAP1 localization.

    (A) XBP1 mRNA is spliced during the unfolded protein response under ER stress. XBP1 splicing was evaluated in patient 4 with qPCR and normalised to the average of three HCs (wild-type WT). There was no significant difference in the level of unspliced XBP1 (uXBP1), but the amount of spliced XBP1 (sXBP1) was significantly increased (P < 0.001, two-tailed Z-test) and thus the ratio of sXBP1/uXBP1 was also increased (P < 0.001, two-tailed Z-test). (B) PBMCs from three HCs and patient 4 were seeded onto polylysine coverslips and incubated with mitotracker deep red to label the mitochondria (grey). These were fixed with methanol and labelled with DAPI (blue), anti-TRAP1 antibodies (green), and anti-calnexin antibodies (red) to stain the ER. Scale bar = 2 μm. TRAP1 showed localization to the ER in WT cells. In patient 4, the mitochondria showed increased association with the ER and TRAP1 and less structural definition.

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    Figure 4. Confocal microscopy: co-localization of TRAP1 and TNFR1 in PBMCs from patients with TNF receptor associated periodic syndrome (TRAPS).

    (A) PBMCs were isolated from TRAPS patients with different mutations and from three HCs (wild-type, WT), fixed, and labelled with the nuclear stain DAPI (blue), anti-TNFR1 antibodies (red), and anti-TRAP1 antibodies (green). Scale bar = 5 μm. (B) The degree of red-green co-localization was quantified in at least three images for each patient and from three HCs (WT). *P < 0.05 **P < 0.01 (unpaired two-tailed t tests).

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    Figure 5. Serum IL-18 measurements.

    (A) Serum IL-18 levels in HCs, patient IV-1, and IV-2 before and after haematopoietic stem cell transplantation and from two patients with the autoinflammatory disease periodic fever immunodeficiency and thrombocytopenia (PFIT; see main text); outlined and grey squares represent repeated measures from two patients at different times. Pre-haematopoietic stem cell transplantation IL-18 levels in IV-1 and IV-2 and patient 4 were significantly higher than those in HCs and similar to PFIT patients; ***P < 0.001 (two-tailed unpaired t tests). (B) Corresponding IL-18 binding protein (IL-18BP) levels in IV-1, IV-2, and patient 4 which showed no significant difference to levels in HCs or patients with PFIT. (C) IL-18 and IL-1 secretion in PBMCs cultured from patient 4 versus an HC, at baseline or with stimulation with 100 ng/ml LPS for 4 h, or LPS for 4 h followed by 5 mM ATP for 15 min. (D) Caspase-1 activation measured as the median fluorescence intensity of cells stained with FLICA detected by flow cytometry in patient 4 and an HC. (C, D) Patient shown in grey and HC in black. Experiment was only performed once because of limited availability of cells, and thus, statistical analysis was not possible.

Tables

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    Table 1.

    Settings for the E-SCAN electron spin resonance spectrometer.

    Centre field1.99g
    Microwave power20 mW
    Modulation amplitude2 G
    Sweep time10 s
    Number of scans10
    Field sweep60 G

Supplementary Materials

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  • Table S1 Routine investigations and treatments received.

  • Table S2 Comparison of variants identified in CAKUT and VACTERL associations (Meyer et al, 2003).

  • Table S3 Cytokine measurements from the serum of the two affected children in Family A.

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TRAP1 mutations in autoinflammation
Ariane SI Standing, Ying Hong, Coro Paisan-Ruiz, Ebun Omoyinmi, Alan Medlar, Horia Stanescu, Robert Kleta, Dorota Rowcenzio, Philip Hawkins, Helen Lachmann, Michael F McDermott, Despina Eleftheriou, Nigel Klein, Paul A Brogan
Life Science Alliance Dec 2019, 3 (2) e201900376; DOI: 10.26508/lsa.201900376

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TRAP1 mutations in autoinflammation
Ariane SI Standing, Ying Hong, Coro Paisan-Ruiz, Ebun Omoyinmi, Alan Medlar, Horia Stanescu, Robert Kleta, Dorota Rowcenzio, Philip Hawkins, Helen Lachmann, Michael F McDermott, Despina Eleftheriou, Nigel Klein, Paul A Brogan
Life Science Alliance Dec 2019, 3 (2) e201900376; DOI: 10.26508/lsa.201900376
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Volume 3, No. 2
February 2020
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