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History
- Received July 31, 2020
- Revision received August 26, 2020
- Accepted August 31, 2020
- Published online September 24, 2020.
Copyright & Usage
© 2020 Tanevski et al. This article is available under a Creative Commons License (Attribution 4.0 International, as described at https://creativecommons.org/licenses/by/4.0/).
Author Information
- Jovan Tanevski1,2,*,
- Thin Nguyen3,*,
- Buu Truong4,*,
- Nikos Karaiskos5,
- Mehmet Eren Ahsen6,7,
- Xinyu Zhang8,
- Chang Shu8,27,
- Ke Xu8,
- Xiaoyu Liang8,
- Ying Hu9,
- Hoang VV Pham4,
- Li Xiaomei4,
- Thuc D Le4,
- Adi L Tarca10,
- Gaurav Bhatti11,12,
- Roberto Romero11,12,
- Nestoras Karathanasis13,
- Phillipe Loher13,
- Yang Chen14,
- Zhengqing Ouyang15,
- Disheng Mao16,
- Yuping Zhang16,
- Maryam Zand17,
- Jianhua Ruan17,
- Christoph Hafemeister18,
- Peng Qiu19,20,
- Duc Tran21,
- Tin Nguyen21,
- Attila Gabor1,
- Thomas Yu22,
- Justin Guinney22,
- Enrico Glaab23,
- Roland Krause24,
- Peter Banda24,
- DREAM SCTC Consortium‡,
- Gustavo Stolovitzky25,
- Nikolaus Rajewsky5,†,
- Julio Saez-Rodriguez1,26,† and
- Pablo Meyer25⇑
- 1Institute for Computational Biomedicine, Faculty of Medicine, Heidelberg University Hospital and Heidelberg University, Heidelberg, Germany
- 2Department of Knowledge Technologies, Jožef Stefan Institute, Ljubljana, Slovenia
- 3Deakin University, Geelong, Australia
- 4University of South Australia, Mawson Lakes, Australia
- 5Berlin Institute for Medical Systems Biology, Max Delbrück Center for Molecular Medicine in the Helmholtz Association, Berlin, Germany
- 6Icahn School of Medicine at Mount Sinai, New York City, NY, USA
- 7University of Illinois, Urbana-Champaign, Champaign, IL, USA
- 8Department of Psychiatry, Yale School of Medicine, New Haven, CT, USA
- 9Center for Biomedical Informatics and Information Technology, National Cancer Institute, Bethesda, MD, USA
- 10Department of Obstetrics and Gynecology and Department of Computer Science, Wayne State University, Detroit, MI, USA
- 11Perinatology Research Branch, National Institute of Child Health and Human Development (NICHD)/National Insitutes of Health (NIH)/ Department of Health & Human Services (DHHS), Bethesda, MD, USA
- 12Perinatology Research Branch, NICHD/NIH/DHHS, Detroit, MI, USA
- 13Computational Medicine Center, Thomas Jefferson University, Philadelphia, PA, USA
- 14The Jackson Laboratory for Genomic Medicine, Farmington, CT, USA
- 15University of Massachusetts, Amherst, MA, USA
- 16University of Connecticut, Storrs, CT, USA
- 17University of Texas at San Antonio, San Antonio, TX, USA
- 18New York Genome Center, New York City, NY, USA
- 19Georgia Institute of Technology, Atlanta, GA, USA
- 20Emory University, Atlanta, GA, USA
- 21University of Nevada, Reno, NV, USA
- 22Sage Bionetworks, Seattle, WA, USA
- 23Biomedical Data Science Group, Luxembourg Centre for Systems Biomedicine, University of Luxembourg, Esch-sur Alzette, Luxembourg
- 24Bioinformatics Core Group, Luxembourg Centre for Systems Biomedicine, University of Luxembourg, Esch-sur Alzette, Luxembourg
- 25International Buisness Machines (IBM) T.J. Watson Research Center, Yorktown Heights, NY, USA
- 26Joint Research Centre for Computational Biomedicine, Faculty of Medicine, RWTH Aachen University, Aachen, Germany
- 27Department of Pediatrics, Columbia University Irving Medical Center, New York, NY, USA
- Correspondence: pmeyerr{at}us.ibm.com
↵* Jovan Tanevski, Thin Nguyen, and Buu Truong contributed equally to this work
Funding
PROACTIVE 2017 “From Single-Cell to Multi-Cells Information Systems Analysis”
C92F17003530005BD CamilloNational Institutes of Health
U54CA21729J RuanIndian Council of Medical Research - Junior Research Fellowship
S AhmadNational Natural Science Foundation of China
61702421 and 61772426X Wang
Predicting cells position from single-cell transcriptomics
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