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Reference-free transcriptome exploration reveals novel RNAs for prostate cancer diagnosis

View ORCID ProfileMarina Pinskaya, Zohra Saci, Mélina Gallopin, Marc Gabriel, Ha TN Nguyen, Virginie Firlej, Marc Descrimes, Audrey Rapinat, View ORCID ProfileDavid Gentien, Alexandre de la Taille, View ORCID ProfileArturo Londoño-Vallejo, Yves Allory, View ORCID ProfileDaniel Gautheret  Correspondence email, View ORCID ProfileAntonin Morillon  Correspondence email
Marina Pinskaya
1ncRNA, Epigenetic and Genome Fluidity, Université Paris Sciences & Lettres (PSL), Sorbonne Université, Centre National de la Recherche Scientifique (CNRS), Institut Curie, Research Center, Paris, France
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  • ORCID record for Marina Pinskaya
Zohra Saci
1ncRNA, Epigenetic and Genome Fluidity, Université Paris Sciences & Lettres (PSL), Sorbonne Université, Centre National de la Recherche Scientifique (CNRS), Institut Curie, Research Center, Paris, France
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Mélina Gallopin
2Institute for Integrative Biology of the Cell, Commissariat à l'Energie Atomique, CNRS, Université Paris-Sud, Université Paris-Saclay, Gif sur Yvette, France
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Marc Gabriel
1ncRNA, Epigenetic and Genome Fluidity, Université Paris Sciences & Lettres (PSL), Sorbonne Université, Centre National de la Recherche Scientifique (CNRS), Institut Curie, Research Center, Paris, France
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Ha TN Nguyen
2Institute for Integrative Biology of the Cell, Commissariat à l'Energie Atomique, CNRS, Université Paris-Sud, Université Paris-Saclay, Gif sur Yvette, France
3Thuyloi University, Hanoi, Vietnam
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Virginie Firlej
4Université Paris-Est Créteil, Créteil, France
5 Institut National de la Santé et de la Recherche Médicale, U955, Equipe 7, Créteil, France
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Marc Descrimes
1ncRNA, Epigenetic and Genome Fluidity, Université Paris Sciences & Lettres (PSL), Sorbonne Université, Centre National de la Recherche Scientifique (CNRS), Institut Curie, Research Center, Paris, France
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Audrey Rapinat
6Translational Research Department, Genomics Platform, Institut Curie, Université PSL, Paris, France
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David Gentien
6Translational Research Department, Genomics Platform, Institut Curie, Université PSL, Paris, France
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  • ORCID record for David Gentien
Alexandre de la Taille
4Université Paris-Est Créteil, Créteil, France
5 Institut National de la Santé et de la Recherche Médicale, U955, Equipe 7, Créteil, France
7 Assistance Publique – Hôpitaux de Paris, Hôpital Henri Mondor, Département d’Urologie, Créteil, France
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Arturo Londoño-Vallejo
8Telomeres and Cancer, Université PSL, Sorbonne Université, CNRS, Institut Curie, Research Center, Paris, France
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  • ORCID record for Arturo Londoño-Vallejo
Yves Allory
9Compartimentation et Dynamique Cellulaire, Université PSL, Sorbonne Université, CNRS, Institut Curie, Research Center, Paris, France
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Daniel Gautheret
2Institute for Integrative Biology of the Cell, Commissariat à l'Energie Atomique, CNRS, Université Paris-Sud, Université Paris-Saclay, Gif sur Yvette, France
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  • ORCID record for Daniel Gautheret
  • For correspondence: daniel.gautheret@u-psud.fr
Antonin Morillon
1ncRNA, Epigenetic and Genome Fluidity, Université Paris Sciences & Lettres (PSL), Sorbonne Université, Centre National de la Recherche Scientifique (CNRS), Institut Curie, Research Center, Paris, France
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  • For correspondence: antonin.morillon@curie.fr
Published 15 November 2019. DOI: 10.26508/lsa.201900449
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Article Information

vol. 2 no. 6 e201900449
DOI 
https://doi.org/10.26508/lsa.201900449
PubMed 
31732695

Published By 
Life Science Alliance
Online ISSN 
2575-1077
History 
  • Received June 4, 2019
  • Revision received November 5, 2019
  • Accepted November 5, 2019
  • Published online November 15, 2019.

Copyright & Usage 
© 2019 Pinskaya et al. This article is available under a Creative Commons License (Attribution 4.0 International, as described at https://creativecommons.org/licenses/by/4.0/).

Author Information

  1. Marina Pinskaya1,*,
  2. Zohra Saci1,*,
  3. Mélina Gallopin2,
  4. Marc Gabriel1,
  5. Ha TN Nguyen2,3,
  6. Virginie Firlej4,5,
  7. Marc Descrimes1,
  8. Audrey Rapinat6,
  9. David Gentien6,
  10. Alexandre de la Taille4,5,7,
  11. Arturo Londoño-Vallejo8,
  12. Yves Allory9,
  13. Daniel Gautheret2⇑ and
  14. Antonin Morillon1⇑
  1. 1ncRNA, Epigenetic and Genome Fluidity, Université Paris Sciences & Lettres (PSL), Sorbonne Université, Centre National de la Recherche Scientifique (CNRS), Institut Curie, Research Center, Paris, France
  2. 2Institute for Integrative Biology of the Cell, Commissariat à l'Energie Atomique, CNRS, Université Paris-Sud, Université Paris-Saclay, Gif sur Yvette, France
  3. 3Thuyloi University, Hanoi, Vietnam
  4. 4Université Paris-Est Créteil, Créteil, France
  5. 5 Institut National de la Santé et de la Recherche Médicale, U955, Equipe 7, Créteil, France
  6. 6Translational Research Department, Genomics Platform, Institut Curie, Université PSL, Paris, France
  7. 7 Assistance Publique – Hôpitaux de Paris, Hôpital Henri Mondor, Département d’Urologie, Créteil, France
  8. 8Telomeres and Cancer, Université PSL, Sorbonne Université, CNRS, Institut Curie, Research Center, Paris, France
  9. 9Compartimentation et Dynamique Cellulaire, Université PSL, Sorbonne Université, CNRS, Institut Curie, Research Center, Paris, France
  1. Correspondence: antonin.morillon{at}curie.fr
  2. daniel.gautheret{at}u-psud.fr
  1. ↵* Marina Pinskaya and Zohra Saci contributed equally to this work

  • Zohra Saci’s present address is CHU Sainte-Justine Research Centre, University of Montreal, Montreal, Quebec, Canada

View Full Text

Funding

  • INCa-Ligue-ARC PAIR program

    Y Allory, A Londoño-Vallejo
  • ICGex program

    A Londoño-Vallejo, A Morillon
  • Next Generation Sequencing Platform, Genomics Platform

    ANR-10-EQPX-03, ANR10-INBS-09-08, ANR-10-IDEX-0001-02 PSL, ANR-11-LBX-0044
    A Morillon
  • European Research Council

    DARK-616180-ERC-2014
    A Morillon
  • ITMO Cancer–Systems Biology

    bio2014-04
    D Gautheret
  • Agence Nationale de la Recherche “France Génomique”

    ANR-10-INBS-0009
    D Gautheret
  • Institut National du Cancer (INCa)

    INCa-DGOS-4654 SIRIC11-002
  • Genomics Platform

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Blind discovery of RNA biomarkers
Marina Pinskaya, Zohra Saci, Mélina Gallopin, Marc Gabriel, Ha TN Nguyen, Virginie Firlej, Marc Descrimes, Audrey Rapinat, David Gentien, Alexandre de la Taille, Arturo Londoño-Vallejo, Yves Allory, Daniel Gautheret, Antonin Morillon
Life Science Alliance Nov 2019, 2 (6) e201900449; DOI: 10.26508/lsa.201900449

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Blind discovery of RNA biomarkers
Marina Pinskaya, Zohra Saci, Mélina Gallopin, Marc Gabriel, Ha TN Nguyen, Virginie Firlej, Marc Descrimes, Audrey Rapinat, David Gentien, Alexandre de la Taille, Arturo Londoño-Vallejo, Yves Allory, Daniel Gautheret, Antonin Morillon
Life Science Alliance Nov 2019, 2 (6) e201900449; DOI: 10.26508/lsa.201900449
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Volume 2, No. 6
December 2019
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  • Molecular Diagnostics & Diagnostic Imaging
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