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Reconstructing B-cell receptor sequences from short-read single-cell RNA sequencing with BRAPeS

View ORCID ProfileShaked Afik, Gabriel Raulet, View ORCID ProfileNir Yosef  Correspondence email
Shaked Afik
1Center for Computational Biology, University of California, Berkeley, Berkeley, CA, USA
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  • ORCID record for Shaked Afik
Gabriel Raulet
2Department of Computer Science, University of California, Davis, Davis, CA, USA
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Nir Yosef
1Center for Computational Biology, University of California, Berkeley, Berkeley, CA, USA
3Department of Electrical Engineering and Computer Science, University of California, Berkeley, Berkeley, CA, USA
4Ragon Institute of Massachusetts General Hospital, Massachusetts Institute of Technology and Harvard, Cambridge, MA, USA
5Chan Zuckerberg Biohub, San Francisco, CA, USA
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  • For correspondence: niryosef@berkeley.edu
Published 26 August 2019. DOI: 10.26508/lsa.201900371
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Article Information

vol. 2 no. 4 e201900371
DOI 
https://doi.org/10.26508/lsa.201900371
PubMed 
31451449

Published By 
Life Science Alliance
Online ISSN 
2575-1077
History 
  • Received March 8, 2019
  • Revision received August 13, 2019
  • Accepted August 14, 2019
  • Published online August 26, 2019.

Copyright & Usage 
© 2019 Afik et al. This article is available under a Creative Commons License (Attribution 4.0 International, as described at https://creativecommons.org/licenses/by/4.0/).

Author Information

  1. Shaked Afik1,*,
  2. Gabriel Raulet2,* and
  3. Nir Yosef1,3,4,5⇑
  1. 1Center for Computational Biology, University of California, Berkeley, Berkeley, CA, USA
  2. 2Department of Computer Science, University of California, Davis, Davis, CA, USA
  3. 3Department of Electrical Engineering and Computer Science, University of California, Berkeley, Berkeley, CA, USA
  4. 4Ragon Institute of Massachusetts General Hospital, Massachusetts Institute of Technology and Harvard, Cambridge, MA, USA
  5. 5Chan Zuckerberg Biohub, San Francisco, CA, USA
  1. Correspondence: niryosef{at}berkeley.edu
  1. ↵* Shaked Afik and Gabriel Raulet contributed equally to this work

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BCR reconstruction from short scRNA-seq
Shaked Afik, Gabriel Raulet, Nir Yosef
Life Science Alliance Aug 2019, 2 (4) e201900371; DOI: 10.26508/lsa.201900371

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BCR reconstruction from short scRNA-seq
Shaked Afik, Gabriel Raulet, Nir Yosef
Life Science Alliance Aug 2019, 2 (4) e201900371; DOI: 10.26508/lsa.201900371
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Volume 2, No. 4
August 2019
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  • Genomics & Functional Genomics
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