Vienna RNA secondary structure server

Ivo L Hofacker

doi:10.1093/nar/gkg599

Vienna RNA secondary structure server

Nucleic Acids Res. 2003 Jul 1;31(13):3429-31. doi: 10.1093/nar/gkg599.

Author

Ivo L Hofacker¹

Affiliation

¹ Institut für Theoretische Chemie und Molekulare Strukturbiologie, Universität Wien, Währingerstrasse 17, A-1090 Wien, Austria. ivo@tbi.univie.ac.at

Abstract

The Vienna RNA secondary structure server provides a web interface to the most frequently used functions of the Vienna RNA software package for the analysis of RNA secondary structures. It currently offers prediction of secondary structure from a single sequence, prediction of the consensus secondary structure for a set of aligned sequences and the design of sequences that will fold into a predefined structure. All three services can be accessed via the Vienna RNA web server at http://rna.tbi.univie.ac.at/.

Publication types

Research Support, Non-U.S. Gov't

MeSH terms

Algorithms
Computer Graphics
Internet
Nucleic Acid Conformation
RNA / chemistry*
Sequence Alignment
Sequence Analysis, RNA / methods*
Software*

Substances

RNA